Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | CDG60_RS02165 | Genome accession | NZ_CP032134 |
| Coordinates | 290413..290739 (+) | Length | 108 a.a. |
| NCBI ID | WP_087513602.1 | Uniprot ID | A0A3B7LSX6 |
| Organism | Acinetobacter chinensis strain WCHAc010005 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 285413..295739
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG60_RS02140 (CDG60_02140) | hemC | 286075..286992 (+) | 918 | WP_087513598.1 | hydroxymethylbilane synthase | - |
| CDG60_RS02145 (CDG60_02145) | - | 286996..287784 (+) | 789 | WP_087513599.1 | uroporphyrinogen-III synthase | - |
| CDG60_RS02150 (CDG60_02150) | - | 287781..288617 (+) | 837 | WP_087513600.1 | hypothetical protein | - |
| CDG60_RS02155 (CDG60_02155) | - | 288623..289816 (+) | 1194 | WP_087513601.1 | hypothetical protein | - |
| CDG60_RS02160 (CDG60_02160) | - | 289824..290255 (+) | 432 | WP_087513613.1 | thioesterase family protein | - |
| CDG60_RS02165 (CDG60_02165) | hns | 290413..290739 (+) | 327 | WP_087513602.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| CDG60_RS02170 (CDG60_02170) | gspN | 290903..291649 (+) | 747 | WP_087513603.1 | type II secretion system protein N | - |
| CDG60_RS02175 (CDG60_02175) | - | 291646..292491 (+) | 846 | WP_087513604.1 | type II secretion system protein N | - |
| CDG60_RS02180 (CDG60_02180) | gspD | 292534..294813 (+) | 2280 | WP_087513605.1 | type II secretion system secretin GspD | - |
| CDG60_RS02185 (CDG60_02185) | - | 294888..295544 (+) | 657 | WP_087513606.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12248.99 Da Isoelectric Point: 8.4122
>NTDB_id=313814 CDG60_RS02165 WP_087513602.1 290413..290739(+) (hns) [Acinetobacter chinensis strain WCHAc010005]
MMPDISNLSVEELKRLQVEAEALIASKKDQAVEDAYNQILDIADKVGLSIEQILEYGSSKRKKGTRKSVEPRYRSKSNPS
ETWTGRGKQPRWLVAELEKGAKLEDFLI
MMPDISNLSVEELKRLQVEAEALIASKKDQAVEDAYNQILDIADKVGLSIEQILEYGSSKRKKGTRKSVEPRYRSKSNPS
ETWTGRGKQPRWLVAELEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=313814 CDG60_RS02165 WP_087513602.1 290413..290739(+) (hns) [Acinetobacter chinensis strain WCHAc010005]
ATGATGCCAGACATCAGTAATTTATCAGTTGAAGAGTTAAAGCGTTTACAGGTTGAAGCAGAGGCATTAATTGCATCCAA
AAAAGATCAGGCTGTAGAAGATGCTTATAATCAGATTCTTGATATTGCAGATAAAGTTGGTCTAAGTATCGAACAGATTC
TTGAGTACGGTTCAAGCAAACGTAAAAAAGGCACACGCAAATCGGTAGAGCCACGCTACAGAAGTAAAAGCAATCCATCT
GAAACCTGGACGGGTCGCGGTAAACAGCCACGCTGGTTGGTTGCTGAACTTGAAAAAGGTGCAAAACTTGAAGATTTTCT
GATCTAA
ATGATGCCAGACATCAGTAATTTATCAGTTGAAGAGTTAAAGCGTTTACAGGTTGAAGCAGAGGCATTAATTGCATCCAA
AAAAGATCAGGCTGTAGAAGATGCTTATAATCAGATTCTTGATATTGCAGATAAAGTTGGTCTAAGTATCGAACAGATTC
TTGAGTACGGTTCAAGCAAACGTAAAAAAGGCACACGCAAATCGGTAGAGCCACGCTACAGAAGTAAAAGCAATCCATCT
GAAACCTGGACGGGTCGCGGTAAACAGCCACGCTGGTTGGTTGCTGAACTTGAAAAAGGTGCAAAACTTGAAGATTTTCT
GATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
81.481 |
100 |
0.815 |