Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   SEZ_RS02940 Genome accession   NC_011134
Coordinates   603113..604150 (+) Length   345 a.a.
NCBI ID   WP_012515222.1    Uniprot ID   B4U1S9
Organism   Streptococcus equi subsp. zooepidemicus MGCS10565     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 598113..609150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SEZ_RS02915 (Sez_0572) - 598427..599758 (+) 1332 WP_012515217.1 dipeptidase -
  SEZ_RS02920 (Sez_0573) arcC 599776..600726 (+) 951 WP_012515218.1 carbamate kinase -
  SEZ_RS02925 (Sez_0574) asnA 600945..601937 (+) 993 WP_012515219.1 aspartate--ammonia ligase -
  SEZ_RS02930 (Sez_0575) rsmD 602106..602645 (+) 540 WP_012515220.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SEZ_RS02935 (Sez_0576) coaD 602635..603135 (+) 501 WP_012515221.1 pantetheine-phosphate adenylyltransferase -
  SEZ_RS02940 (Sez_0577) sepM 603113..604150 (+) 1038 WP_012515222.1 SepM family pheromone-processing serine protease Regulator
  SEZ_RS02945 (Sez_0578) - 604756..605370 (+) 615 WP_012678319.1 YutD family protein -
  SEZ_RS02950 (Sez_0579) rlmN 605374..606456 (+) 1083 WP_012515224.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SEZ_RS02955 (Sez_0580) - 607047..607925 (+) 879 WP_041785346.1 ABC transporter ATP-binding protein -
  SEZ_RS02960 (Sez_0581) - 607929..608654 (+) 726 WP_012515226.1 ABC transporter permease -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 37485.14 Da        Isoelectric Point: 9.4221

>NTDB_id=31364 SEZ_RS02940 WP_012515222.1 603113..604150(+) (sepM) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MKTIKKFKWWLIGLVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVDKDVKKANPKAIRNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=31364 SEZ_RS02940 WP_012515222.1 603113..604150(+) (sepM) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTAGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCGGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAACGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGGATAAGGACGTCAAAAAAGCAAATCCTAAGGCCATTCGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(130-193)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(233-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B4U1S9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

70.145

100

0.701

Multiple sequence alignment