Detailed information NTG0031354

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SEZ_RS00770
• Genome accession: NC_011134
• Coordinates: 133501..134454 (+)
• Length: 317 a.a.
• NCBI ID: WP_012514788.1
• Uniprot ID: B4U062
• Organism: Streptococcus equi subsp. zooepidemicus MGCS10565
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	132053..133395	133501..134454	flank	106

Gene organization within MGE regions

Location: 132053..134454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEZ_RS00770 (Sez_0123)	comYH	133501..134454 (+)	954	WP_012514788.1	class I SAM-dependent methyltransferase	Machinery gene

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35736.74 Da
• Isoelectric Point: 4.6973

>NTDB_id=31354 SEZ_RS00770 WP_012514788.1 133501..134454(+) (comYH) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAQTILNHSHKSIDYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDLIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVVALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI

Nucleotide

• Length: 954 bp

>NTDB_id=31354 SEZ_RS00770 WP_012514788.1 133501..134454(+) (comYH) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGCTAACCAAGGAGGAGTGGCGTCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGTTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGAACAGGTAATCTAGCTCAAACTATTTTAAACCATTCACATAAGA
GCATTGATTATTTAGGCATTGAGCTTGATGATTTACTAATTGATCTATCAGCTAGTATCGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATCTCATCATTAGCGATTTGCCAGTTGG
TTTTTATCCTAACGACGATATTGCTAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAAGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGTGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-294)

3D structure

• AlphaFold DB: B4U062

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA159	63.608	99.685	0.634
comYH	Streptococcus mutans UA140	63.608	99.685	0.634