Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   Ahae11616_RS13850 Genome accession   NZ_CP032002
Coordinates   2875884..2876768 (-) Length   294 a.a.
NCBI ID   WP_008942322.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain 11616     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2870884..2881768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Ahae11616_RS13830 (Ahae11616_13930) - 2871490..2872569 (+) 1080 WP_017394568.1 PhoH family protein -
  Ahae11616_RS13835 (Ahae11616_13935) ybeY 2872588..2873073 (+) 486 WP_005088155.1 rRNA maturation RNase YbeY -
  Ahae11616_RS13840 (Ahae11616_13940) - 2873085..2873384 (+) 300 WP_005088154.1 antibiotic biosynthesis monooxygenase family protein -
  Ahae11616_RS13845 (Ahae11616_13945) - 2873455..2875614 (-) 2160 WP_005088153.1 TonB-dependent siderophore receptor -
  Ahae11616_RS13850 (Ahae11616_13950) tonB2 2875884..2876768 (-) 885 WP_008942322.1 energy transducer TonB Machinery gene
  Ahae11616_RS13855 (Ahae11616_13955) - 2877005..2877688 (+) 684 WP_004637833.1 hypothetical protein -
  Ahae11616_RS13860 (Ahae11616_13960) - 2877883..2878599 (+) 717 WP_004637832.1 DUF3108 domain-containing protein -
  Ahae11616_RS13865 (Ahae11616_13965) - 2878744..2879319 (+) 576 WP_118903205.1 xanthine phosphoribosyltransferase -
  Ahae11616_RS13870 (Ahae11616_13970) thyA 2879524..2880366 (+) 843 WP_005083621.1 thymidylate synthase -
  Ahae11616_RS13875 (Ahae11616_13975) - 2880387..2880896 (+) 510 WP_004637828.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33521.00 Da        Isoelectric Point: 6.8580

>NTDB_id=313304 Ahae11616_RS13850 WP_008942322.1 2875884..2876768(-) (tonB2) [Acinetobacter haemolyticus strain 11616]
MWNKINFRTQMTSFWWQDPIFVGAVVIAVMVHGLVLTTQFSMPSPTDTSTKEIAVSVRPSQDKVEHADFLAQTDQQGSGE
FHQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERKKALEELQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHPILDEAARASVRRGAPFGAFDSSMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=313304 Ahae11616_RS13850 WP_008942322.1 2875884..2876768(-) (tonB2) [Acinetobacter haemolyticus strain 11616]
ATGTGGAATAAAATAAATTTTCGTACTCAAATGACTTCCTTTTGGTGGCAAGATCCGATTTTTGTTGGAGCAGTTGTTAT
TGCAGTCATGGTACATGGCCTCGTACTGACAACACAATTTTCGATGCCGTCACCTACTGATACATCAACCAAAGAAATCG
CCGTGTCTGTACGTCCAAGTCAAGATAAGGTCGAGCATGCAGATTTTTTAGCGCAAACTGATCAACAAGGATCAGGTGAA
TTTCATCAAGCACATCGTATGTCTAGTGATATGCCCACGCCAATGCAAAGTGATGCAACCACAGGAGAGCATGAGCTAGA
AAGTCTCGAAACCATACAACAGAAGCGTGAACTCCTCTTTGAGGAAAAAGTGTTAATGACAGTGTTAAGTTGGCAAAAGC
AAGCTGAACAGAATGAACGTAAGAAAGCATTAGAAGAATTACAAAGTCAATTTCAAGCCAAAGCTGCGATGGTGGCAAGT
TTAGAAGCGCAATATTTACAACGCCAACAAAATTTTAGCCGTAAGCAACGTATTAAAACGGTTGATGGGATACAAGCGAA
ACAAGATGCATCGGCAGCATATCTCGATAAATTCCGACAAAAAGTTGAGTTGTATGGCAATCGTTATTATCCCGATGCGG
CAAAACAGCAACGCTTAGCGGGTGAAGTACGTTTAATGGTGATTTTAAATGCGCAAGGCGGTATCCGAGCCATTCGTTTA
ATTGAGAGCTCAGGACATCCGATTTTGGATGAAGCAGCTCGTGCTTCTGTTCGCCGTGGTGCACCATTTGGAGCTTTTGA
CAGCAGTATGAAAGATATTTCTGAGTTACGGATTATCCGAACATGGCGTTTTGATCCAGTGGATGCTGAATTTGAAGTGC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.15

100

0.742

Multiple sequence alignment