Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   AhaeINNSZ174_RS00960 Genome accession   NZ_CP031998
Coordinates   197080..198231 (-) Length   383 a.a.
NCBI ID   WP_005092484.1    Uniprot ID   A0A372MNT8
Organism   Acinetobacter haemolyticus strain INNSZ174     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 192080..203231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeINNSZ174_RS00940 (AhaeINNSZ174_00945) - 193285..193932 (+) 648 WP_017396658.1 TetR/AcrR family transcriptional regulator -
  AhaeINNSZ174_RS00945 (AhaeINNSZ174_00950) - 194035..194955 (+) 921 WP_005085672.1 DMT family transporter -
  AhaeINNSZ174_RS00950 (AhaeINNSZ174_00955) - 195331..195900 (-) 570 WP_005085670.1 Sua5/YciO/YrdC/YwlC family protein -
  AhaeINNSZ174_RS00955 (AhaeINNSZ174_00960) dprA 195938..197068 (-) 1131 WP_115736207.1 DNA-processing protein DprA Machinery gene
  AhaeINNSZ174_RS00960 (AhaeINNSZ174_00965) tsaP 197080..198231 (-) 1152 WP_005092484.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AhaeINNSZ174_RS00965 (AhaeINNSZ174_00970) def 198357..198887 (+) 531 WP_004637502.1 peptide deformylase -
  AhaeINNSZ174_RS00970 (AhaeINNSZ174_00975) - 198908..199345 (+) 438 WP_004637503.1 DUF2946 family protein -
  AhaeINNSZ174_RS00975 (AhaeINNSZ174_00980) - 199419..201515 (+) 2097 WP_160132371.1 TonB-dependent copper receptor -
  AhaeINNSZ174_RS00980 (AhaeINNSZ174_00985) - 201560..202318 (-) 759 WP_160132372.1 hypothetical protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41721.84 Da        Isoelectric Point: 9.4255

>NTDB_id=313239 AhaeINNSZ174_RS00960 WP_005092484.1 197080..198231(-) (tsaP) [Acinetobacter haemolyticus strain INNSZ174]
MKKVLNGIQSFHALGLKKQLIAAAICAGLGMSVNLAHAASPNVSPPSVKVGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLVGKDEGDGCAGIIRRYTGNTSTLRPQVRVEALNNSIPVIPLAHIQQWLER
TSVLPADAIAHTPYILGTADQRVLAGKGQRVYVRGNGIENGQRYGVFREGEPYTILDEHGKKQVLGVELTQVASGVAIST
EKDITTVELTDSYNGEVRRGDRVMPEQDAMLPTLFYPTDANQVTDGGKIIRVMGSIGTAAKNGVVTVDRGTADGIEIGQV
FNAYQDGETVKDPKTKENVKLPGQYVGSVMIFKSFDRISYAYVLESELPIKMGSSIKPPRLDN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=313239 AhaeINNSZ174_RS00960 WP_005092484.1 197080..198231(-) (tsaP) [Acinetobacter haemolyticus strain INNSZ174]
ATGAAAAAGGTTTTAAACGGCATACAATCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCCGCTGCAATATGTGC
AGGACTAGGCATGAGTGTCAATCTTGCACATGCTGCAAGTCCGAACGTTAGTCCACCCTCAGTAAAAGTGGGTGCACCAC
ACGTTTATGTGGTCAAAAAAGGCGATACGCTTTGGGACATTTCAGGTAAGTTTTTAAGCAAGCCTTGGCGTTGGCCTGAG
ATTTGGGCAAGCAATAAGCACGTTAAAAACCCACATTGGATCTATCCAGGCGATCGCTTATTGCTTTGTAGTTTGAATGG
CAAACCATTGGTGGGTAAAGATGAGGGAGATGGCTGTGCGGGTATTATTCGCCGTTATACAGGCAACACCTCAACATTAC
GCCCACAGGTGCGTGTCGAAGCACTCAACAATAGCATTCCAGTTATTCCATTGGCGCACATTCAACAATGGCTCGAGCGT
ACCTCGGTTCTTCCAGCTGATGCAATTGCGCATACACCTTATATCCTGGGTACAGCCGATCAACGTGTACTCGCTGGTAA
AGGTCAACGTGTTTATGTTCGCGGTAACGGTATTGAAAATGGTCAACGCTATGGCGTATTCCGTGAAGGTGAACCGTACA
CCATTCTTGATGAACATGGCAAAAAGCAGGTCCTTGGCGTTGAATTGACCCAAGTTGCTTCAGGTGTTGCTATTAGCACT
GAAAAGGATATTACCACTGTTGAGTTAACCGATAGTTATAACGGTGAAGTTCGTCGTGGTGATCGTGTCATGCCTGAACA
AGATGCCATGTTACCAACATTGTTCTACCCAACCGATGCAAATCAAGTCACTGATGGCGGTAAAATCATTCGTGTCATGG
GTTCAATTGGTACAGCCGCTAAAAATGGTGTTGTCACCGTTGATCGTGGTACAGCTGATGGAATCGAAATCGGACAAGTA
TTTAATGCTTATCAAGACGGTGAAACAGTTAAAGATCCGAAAACGAAAGAAAATGTCAAATTACCAGGACAGTATGTCGG
TAGTGTGATGATCTTTAAGAGCTTTGACCGTATCAGCTATGCGTATGTGCTTGAAAGTGAGTTACCAATAAAAATGGGCT
CAAGTATCAAACCACCTCGTTTAGATAACTAA

Domains


Predicted by InterproScan.

(56-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A372MNT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

72.135

100

0.723


Multiple sequence alignment