Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   Ahae2126ch_RS14275 Genome accession   NZ_CP031991
Coordinates   2950635..2951519 (-) Length   294 a.a.
NCBI ID   WP_008942322.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain 2126ch     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2945635..2956519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Ahae2126ch_RS14255 (Ahae2126ch_14410) - 2946241..2947320 (+) 1080 WP_017394568.1 PhoH family protein -
  Ahae2126ch_RS14260 (Ahae2126ch_14415) ybeY 2947339..2947824 (+) 486 WP_005088155.1 rRNA maturation RNase YbeY -
  Ahae2126ch_RS14265 (Ahae2126ch_14420) - 2947836..2948135 (+) 300 WP_005088154.1 antibiotic biosynthesis monooxygenase -
  Ahae2126ch_RS14270 (Ahae2126ch_14425) - 2948206..2950365 (-) 2160 WP_005088153.1 TonB-dependent siderophore receptor -
  Ahae2126ch_RS14275 (Ahae2126ch_14430) tonB2 2950635..2951519 (-) 885 WP_008942322.1 energy transducer TonB Machinery gene
  Ahae2126ch_RS14280 (Ahae2126ch_14435) - 2951756..2952439 (+) 684 WP_004637833.1 hypothetical protein -
  Ahae2126ch_RS14285 (Ahae2126ch_14440) - 2952634..2953350 (+) 717 WP_004637832.1 DUF3108 domain-containing protein -
  Ahae2126ch_RS14290 (Ahae2126ch_14445) - 2953495..2954070 (+) 576 WP_005088150.1 xanthine phosphoribosyltransferase -
  Ahae2126ch_RS14295 (Ahae2126ch_14450) thyA 2954275..2955117 (+) 843 WP_005083621.1 thymidylate synthase -
  Ahae2126ch_RS14300 (Ahae2126ch_14455) - 2955138..2955647 (+) 510 WP_004637828.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33521.00 Da        Isoelectric Point: 6.8580

>NTDB_id=313223 Ahae2126ch_RS14275 WP_008942322.1 2950635..2951519(-) (tonB2) [Acinetobacter haemolyticus strain 2126ch]
MWNKINFRTQMTSFWWQDPIFVGAVVIAVMVHGLVLTTQFSMPSPTDTSTKEIAVSVRPSQDKVEHADFLAQTDQQGSGE
FHQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERKKALEELQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHPILDEAARASVRRGAPFGAFDSSMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=313223 Ahae2126ch_RS14275 WP_008942322.1 2950635..2951519(-) (tonB2) [Acinetobacter haemolyticus strain 2126ch]
ATGTGGAATAAAATAAATTTTCGTACTCAAATGACTTCCTTTTGGTGGCAAGATCCGATTTTTGTTGGAGCAGTTGTTAT
TGCAGTCATGGTACATGGCCTCGTACTGACAACACAATTTTCGATGCCGTCACCTACTGATACATCAACCAAAGAAATCG
CCGTGTCTGTACGTCCAAGTCAAGATAAGGTCGAGCATGCAGATTTTTTAGCGCAAACTGATCAACAAGGATCAGGTGAA
TTTCATCAAGCACATCGTATGTCTAGTGATATGCCCACGCCAATGCAAAGTGATGCAACCACAGGAGAGCATGAGCTAGA
AAGTCTCGAAACCATACAACAGAAGCGTGAACTCCTCTTTGAGGAAAAAGTGTTAATGACAGTGTTAAGTTGGCAAAAGC
AAGCTGAACAGAATGAACGTAAGAAAGCATTAGAAGAATTACAAAGTCAATTTCAAGCCAAAGCTGCGATGGTGGCAAGT
TTAGAAGCGCAATATTTACAACGCCAACAAAATTTTAGCCGTAAGCAACGTATTAAAACGGTTGATGGGATACAAGCGAA
ACAAGATGCATCGGCAGCATATCTCGATAAATTCCGACAAAAAGTTGAGTTGTATGGCAATCGTTATTATCCCGATGCGG
CAAAACAGCAACGCTTAGCGGGTGAAGTACGTTTAATGGTGATTTTAAATGCGCAAGGCGGTATCCGAGCCATTCGTTTA
ATTGAGAGCTCAGGACATCCGATTTTGGATGAAGCAGCTCGTGCTTCTGTTCGCCGTGGTGCACCATTTGGAGCTTTTGA
CAGCAGTATGAAAGATATTTCTGAGTTACGGATTATCCGAACATGGCGTTTTGATCCAGTGGATGCTGAATTTGAAGTGC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.15

100

0.742

Multiple sequence alignment