Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   Ahae5227_RS14745 Genome accession   NZ_CP031988
Coordinates   3063902..3064786 (-) Length   294 a.a.
NCBI ID   WP_008942322.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain 5227     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3058902..3069786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Ahae5227_RS14725 (Ahae5227_14880) - 3059297..3060289 (-) 993 WP_005028482.1 IS5-like element ISAba23 family transposase -
  Ahae5227_RS14730 (Ahae5227_14885) - 3060384..3060932 (-) 549 Protein_2887 TonB-dependent siderophore receptor -
  Ahae5227_RS14735 (Ahae5227_14890) - 3061046..3062014 (+) 969 WP_012308653.1 IS30 family transposase -
  Ahae5227_RS14740 (Ahae5227_14895) - 3061995..3063632 (-) 1638 Protein_2889 TonB-dependent siderophore receptor -
  Ahae5227_RS14745 (Ahae5227_14900) tonB2 3063902..3064786 (-) 885 WP_008942322.1 energy transducer TonB Machinery gene
  Ahae5227_RS14750 (Ahae5227_14905) - 3065023..3065706 (+) 684 WP_004637833.1 hypothetical protein -
  Ahae5227_RS14755 (Ahae5227_14910) - 3065901..3066617 (+) 717 WP_004637832.1 DUF3108 domain-containing protein -
  Ahae5227_RS14760 (Ahae5227_14915) - 3066762..3067337 (+) 576 WP_004637831.1 xanthine phosphoribosyltransferase -
  Ahae5227_RS14765 (Ahae5227_14920) thyA 3067542..3068384 (+) 843 WP_005083621.1 thymidylate synthase -
  Ahae5227_RS14770 (Ahae5227_14925) - 3068405..3068914 (+) 510 WP_004637828.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33521.00 Da        Isoelectric Point: 6.8580

>NTDB_id=313181 Ahae5227_RS14745 WP_008942322.1 3063902..3064786(-) (tonB2) [Acinetobacter haemolyticus strain 5227]
MWNKINFRTQMTSFWWQDPIFVGAVVIAVMVHGLVLTTQFSMPSPTDTSTKEIAVSVRPSQDKVEHADFLAQTDQQGSGE
FHQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERKKALEELQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHPILDEAARASVRRGAPFGAFDSSMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=313181 Ahae5227_RS14745 WP_008942322.1 3063902..3064786(-) (tonB2) [Acinetobacter haemolyticus strain 5227]
ATGTGGAATAAAATAAATTTTCGTACTCAAATGACTTCCTTTTGGTGGCAAGATCCGATTTTTGTTGGAGCAGTTGTTAT
TGCAGTCATGGTACATGGCCTCGTACTGACAACACAATTTTCGATGCCGTCACCTACTGATACATCAACCAAAGAAATCG
CCGTGTCTGTACGTCCAAGTCAAGATAAGGTCGAGCATGCAGATTTTTTAGCGCAAACTGATCAACAAGGATCAGGTGAA
TTTCATCAAGCACATCGTATGTCTAGTGATATGCCCACGCCAATGCAAAGTGATGCAACCACAGGAGAGCATGAGCTAGA
AAGTCTCGAAACCATACAACAGAAGCGTGAACTCCTCTTTGAGGAAAAAGTGTTAATGACAGTGTTAAGTTGGCAAAAGC
AAGCTGAACAGAATGAACGTAAGAAAGCATTAGAAGAATTACAAAGTCAATTTCAAGCCAAAGCTGCGATGGTGGCAAGT
TTAGAAGCGCAATATTTACAACGCCAACAAAATTTTAGCCGTAAGCAACGTATTAAAACGGTTGATGGGATACAAGCGAA
ACAAGATGCATCGGCAGCATATCTCGATAAATTCCGACAAAAAGTTGAGTTGTATGGCAATCGTTATTATCCCGATGCGG
CAAAACAGCAACGCTTAGCGGGTGAAGTACGTTTAATGGTGATTTTAAATGCGCAAGGCGGTATCCGAGCCATTCGTTTA
ATTGAGAGCTCAGGACATCCGATTTTGGATGAAGCAGCTCGTGCTTCTGTTCGCCGTGGTGCACCATTTGGAGCTTTTGA
CAGCAGTATGAAAGATATTTCTGAGTTACGGATTATCCGAACATGGCGTTTTGATCCAGTGGATGCTGAATTTGAAGTGC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.15

100

0.742

Multiple sequence alignment