Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   Ahae5227_RS10240 Genome accession   NZ_CP031988
Coordinates   2116408..2117361 (-) Length   317 a.a.
NCBI ID   WP_008941048.1    Uniprot ID   A0AAJ2YW55
Organism   Acinetobacter haemolyticus strain 5227     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2111408..2122361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Ahae5227_RS10215 (Ahae5227_10355) - 2111456..2112247 (-) 792 WP_216071387.1 DUF4198 domain-containing protein -
  Ahae5227_RS10220 (Ahae5227_10360) - 2112478..2113698 (+) 1221 WP_017396135.1 MFS transporter -
  Ahae5227_RS10225 (Ahae5227_10365) - 2113744..2114694 (-) 951 WP_008941049.1 siderophore ABC transporter substrate-binding protein -
  Ahae5227_RS10230 (Ahae5227_10370) - 2114704..2115468 (-) 765 WP_160123961.1 ABC transporter ATP-binding protein -
  Ahae5227_RS10235 (Ahae5227_10375) - 2115459..2116415 (-) 957 WP_005081105.1 iron chelate uptake ABC transporter family permease subunit -
  Ahae5227_RS10240 (Ahae5227_10380) ceuB 2116408..2117361 (-) 954 WP_008941048.1 ABC transporter permease Machinery gene
  Ahae5227_RS10245 (Ahae5227_10385) - 2117682..2118299 (-) 618 WP_160123962.1 LysE family translocator -
  Ahae5227_RS10250 (Ahae5227_10390) - 2118390..2119364 (-) 975 WP_008941046.1 ion transporter -
  Ahae5227_RS10255 (Ahae5227_10395) - 2119635..2121092 (+) 1458 WP_160123963.1 DASS family sodium-coupled anion symporter -
  Ahae5227_RS10260 (Ahae5227_10400) - 2121140..2121640 (-) 501 WP_160123964.1 hypothetical protein -
  Ahae5227_RS10265 (Ahae5227_10405) - 2121671..2122108 (-) 438 WP_151212143.1 T6SS immunity protein Tdi1 domain-containing protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 34471.59 Da        Isoelectric Point: 9.6461

>NTDB_id=313176 Ahae5227_RS10240 WP_008941048.1 2116408..2117361(-) (ceuB) [Acinetobacter haemolyticus strain 5227]
MIKRRYLLVLLIPLALISLFVGVGDMSLAGLIAGNPQDWQLFWTSRLPRLMAIVVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGVLISIILLPSASIFAKTGFAIIVTLIGAMTFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQLDL
LQNLAGWLQGDFSTILNGQYELIYLSIPVLALIYIFANRFVLAGLGEDFATNLGLNYKQTLFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDHIRKTLSHTALLGALLVLLCDVFGRVVIYPYEVSVSLIMGVVGSVIFLWLLLRRYRYA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=313176 Ahae5227_RS10240 WP_008941048.1 2116408..2117361(-) (ceuB) [Acinetobacter haemolyticus strain 5227]
ATGATTAAACGGCGCTATTTACTGGTTTTACTCATACCTTTGGCATTGATTTCCTTGTTTGTTGGTGTAGGGGATATGAG
TCTTGCTGGATTGATTGCAGGAAATCCACAAGATTGGCAACTCTTTTGGACGAGTCGATTACCACGCCTGATGGCGATTG
TTGTTGCAGGTGCTGGGTTAAGTGTCTGCGGTTTAATTATGCAGTCATTAAGTCGAAATCGCTTTGTTTCACCAACCACA
GCGGGTTTATATGACTGTGCACGGCTGGGCGTTTTAATTTCGATTATTTTGCTTCCAAGTGCTTCTATTTTTGCCAAAAC
TGGATTTGCGATTATTGTCACGCTGATTGGTGCGATGACATTTATGAGTATTCTTGCCACTTTAAAGCACCGAGATACGG
TATTTGTGCCACTCGTTGGGATGATTTTTGGAAGCATTATTTCTGCATTTACGACTTTTATTGCTTTGCAACTTGATTTG
TTGCAGAACTTAGCAGGGTGGTTGCAAGGCGATTTCTCAACCATTTTGAATGGTCAATATGAATTGATTTATTTAAGTAT
TCCCGTTCTTGCATTGATTTATATATTTGCCAATCGTTTTGTCTTGGCCGGCTTGGGTGAAGACTTTGCGACAAATCTAG
GTTTGAACTATAAACAGACACTTTTCTTAGGTTTGCTGCTGGTCTCAGTGATTACTGGGGTGGTGATTGTGACTGTAGGC
GCAATTCCTTTTCTCGGTTTAATTGTGCCAAATCTAGTCAGTCTTTATTTAGGTGATCATATTCGCAAGACGCTTTCACA
TACGGCATTGCTTGGTGCGTTGCTGGTCTTACTGTGTGATGTTTTTGGTCGAGTGGTGATTTATCCCTATGAGGTTTCGG
TCAGCCTGATTATGGGGGTGGTCGGTAGTGTGATCTTCCTGTGGTTATTACTCAGGAGGTATCGTTATGCATAA

Domains


Predicted by InterproScan.

(11-312)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

98.738

0.489


Multiple sequence alignment