Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   AhaeAN3_RS14105 Genome accession   NZ_CP031984
Coordinates   2970259..2971824 (+) Length   521 a.a.
NCBI ID   WP_005087910.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain AN3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2965259..2976824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN3_RS14085 (AhaeAN3_14145) - 2965771..2967072 (+) 1302 WP_005087913.1 homoserine dehydrogenase -
  AhaeAN3_RS14090 (AhaeAN3_14150) thrC 2967131..2968270 (+) 1140 WP_004637599.1 threonine synthase -
  AhaeAN3_RS14095 (AhaeAN3_14155) pbpG 2968330..2969394 (-) 1065 WP_005087912.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AhaeAN3_RS14100 (AhaeAN3_14160) - 2969605..2970240 (+) 636 WP_005083960.1 response regulator -
  AhaeAN3_RS14105 (AhaeAN3_14165) pilS 2970259..2971824 (+) 1566 WP_005087910.1 sensor histidine kinase Regulator
  AhaeAN3_RS14110 (AhaeAN3_14170) pilR 2971847..2973274 (+) 1428 WP_005087908.1 sigma-54-dependent transcriptional regulator Regulator
  AhaeAN3_RS14115 (AhaeAN3_14175) - 2973326..2974492 (-) 1167 WP_005087906.1 S41 family peptidase -
  AhaeAN3_RS14120 (AhaeAN3_14180) gpmI 2974502..2976046 (-) 1545 WP_160127352.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59469.52 Da        Isoelectric Point: 6.5501

>NTDB_id=313148 AhaeAN3_RS14105 WP_005087910.1 2970259..2971824(+) (pilS) [Acinetobacter haemolyticus strain AN3]
MLGKVASSVSQTIYQLGMWYSGYRLIISVCLLLIFLLTAEQLTTNYLYPTLYSYTLIVYIALNVSQLLFLKLFPTHVNKQ
LIAIFLVDVICLSTITFATGGPNLQLSLLYVIIIFASAILLNAQLSLVVTLLAVIMIVYQRFLGNLFDYNNLNHLSNSLL
LVFLFLVVYAIGRIAVQRFKILEALTFHQSIEIHQLQNINRYILEQIEDGYLVLDESNHIVLTNPAANTLLGIHLPVSHE
KTPLIKWQPDLFELIKFSDLEDGEEFTFESQQSLYTVHVRVKHLVVPEQALVLLILKDAQKLTQRVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELFNESDAHQQQMLTRMIRKQAKRIDRIVEDTLAMARNKPTEPQNIHLVEFFESLFEEDLVDVK
HMIQLELSENIQILFDDKQLRQVLINLVRNALRHNASDIPYIEIKVHAEETKVRIDVIDFGLGVAKRDLSQLFKPFFSTE
IKGTGLGLYLSHSFCEANHAKLTYVERQQGACFRIECSIIN

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=313148 AhaeAN3_RS14105 WP_005087910.1 2970259..2971824(+) (pilS) [Acinetobacter haemolyticus strain AN3]
ATGTTGGGAAAAGTTGCATCTTCGGTGTCACAAACCATTTACCAGCTTGGGATGTGGTATAGCGGATATCGCCTCATTAT
TTCCGTATGCCTATTGCTCATTTTCTTGTTAACTGCTGAGCAACTGACCACCAATTATCTTTACCCAACATTGTATTCAT
ATACGCTGATTGTCTATATTGCATTAAATGTCAGTCAGCTTTTATTTCTTAAATTATTTCCGACCCACGTGAATAAACAG
CTGATTGCGATCTTTCTCGTCGATGTCATCTGTTTAAGTACCATTACCTTTGCAACAGGCGGGCCAAACTTACAGCTCAG
TTTGCTCTATGTCATTATTATTTTTGCCTCGGCAATTTTATTGAATGCTCAGCTTTCTCTAGTGGTAACGCTGCTCGCTG
TTATCATGATTGTGTATCAGCGTTTTCTGGGAAATTTATTTGACTACAACAATTTAAACCATCTCAGTAATAGCCTGCTG
TTGGTATTTTTATTCTTGGTGGTATATGCCATAGGGCGCATTGCAGTACAGCGTTTTAAAATTTTAGAAGCGCTTACTTT
TCATCAATCCATTGAAATTCATCAACTCCAAAACATTAACCGTTATATCTTGGAGCAAATTGAGGATGGATATCTGGTTT
TAGATGAAAGTAATCATATTGTTTTAACCAATCCTGCTGCCAATACATTATTAGGCATTCATTTACCTGTTTCCCATGAA
AAAACGCCCTTAATCAAATGGCAACCCGATCTATTTGAACTGATCAAATTCAGTGACCTAGAAGATGGTGAAGAGTTCAC
TTTTGAGTCACAACAAAGTTTGTATACCGTCCATGTACGTGTCAAACATTTGGTCGTACCTGAACAAGCATTAGTTTTAT
TAATTCTCAAAGATGCTCAGAAATTAACTCAGCGTGTACAACAACTTAAACTCGCAGCGCTCGGACAACTTTCTGCCAGT
ATTGCACATGAAATTCGCAATCCTTTAGCCGCGATTGTGCAAGCCAATGAGCTGTTTAATGAAAGCGATGCGCATCAACA
ACAAATGCTCACTCGTATGATTCGTAAACAAGCAAAACGTATCGATCGGATTGTAGAAGATACTTTGGCAATGGCACGCA
ATAAACCGACTGAACCACAAAATATTCATCTTGTGGAGTTCTTTGAAAGTTTATTTGAAGAGGATCTAGTCGATGTCAAA
CACATGATCCAATTAGAGCTTTCAGAGAATATTCAAATCTTATTTGATGACAAACAGTTGCGCCAAGTGCTGATCAATTT
GGTGAGAAATGCATTAAGACACAACGCATCGGATATACCTTATATCGAAATTAAAGTACACGCTGAAGAGACTAAAGTTC
GAATTGATGTTATCGATTTTGGTTTAGGGGTAGCAAAAAGAGACCTTTCTCAACTGTTTAAACCATTTTTTAGTACCGAA
ATCAAAGGAACTGGTTTAGGATTGTATTTGTCTCATAGTTTCTGTGAGGCGAATCATGCAAAGCTCACTTATGTAGAGCG
ACAACAAGGAGCATGCTTCAGGATTGAATGCTCAATAATTAATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

65.631

98.848

0.649

Multiple sequence alignment