Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AhaeAN3_RS08785 Genome accession   NZ_CP031984
Coordinates   1830597..1831550 (-) Length   317 a.a.
NCBI ID   WP_008941048.1    Uniprot ID   A0AAJ2YW55
Organism   Acinetobacter haemolyticus strain AN3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1825597..1836550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN3_RS08760 (AhaeAN3_08825) - 1825645..1826436 (-) 792 WP_208464689.1 DUF4198 domain-containing protein -
  AhaeAN3_RS08765 (AhaeAN3_08830) - 1826667..1827887 (+) 1221 WP_160127139.1 MFS transporter -
  AhaeAN3_RS08770 (AhaeAN3_08835) - 1827933..1828883 (-) 951 WP_075315728.1 siderophore ABC transporter substrate-binding protein -
  AhaeAN3_RS08775 (AhaeAN3_08840) - 1828893..1829657 (-) 765 WP_004638654.1 ABC transporter ATP-binding protein -
  AhaeAN3_RS08780 (AhaeAN3_08845) - 1829648..1830604 (-) 957 WP_005081105.1 iron chelate uptake ABC transporter family permease subunit -
  AhaeAN3_RS08785 (AhaeAN3_08850) ceuB 1830597..1831550 (-) 954 WP_008941048.1 ABC transporter permease Machinery gene
  AhaeAN3_RS08790 (AhaeAN3_08855) - 1831871..1832488 (-) 618 WP_075315731.1 LysE family translocator -
  AhaeAN3_RS08795 (AhaeAN3_08860) - 1832579..1833553 (-) 975 WP_008941046.1 ion transporter -
  AhaeAN3_RS08800 (AhaeAN3_08865) - 1833823..1835280 (+) 1458 WP_008941045.1 DASS family sodium-coupled anion symporter -
  AhaeAN3_RS08805 (AhaeAN3_08870) - 1835340..1836059 (-) 720 WP_160127140.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34471.59 Da        Isoelectric Point: 9.6461

>NTDB_id=313136 AhaeAN3_RS08785 WP_008941048.1 1830597..1831550(-) (ceuB) [Acinetobacter haemolyticus strain AN3]
MIKRRYLLVLLIPLALISLFVGVGDMSLAGLIAGNPQDWQLFWTSRLPRLMAIVVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGVLISIILLPSASIFAKTGFAIIVTLIGAMTFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQLDL
LQNLAGWLQGDFSTILNGQYELIYLSIPVLALIYIFANRFVLAGLGEDFATNLGLNYKQTLFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDHIRKTLSHTALLGALLVLLCDVFGRVVIYPYEVSVSLIMGVVGSVIFLWLLLRRYRYA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=313136 AhaeAN3_RS08785 WP_008941048.1 1830597..1831550(-) (ceuB) [Acinetobacter haemolyticus strain AN3]
ATGATTAAACGGCGCTATTTACTGGTTTTACTCATACCTTTGGCATTGATTTCCTTGTTTGTTGGTGTAGGGGATATGAG
TCTTGCTGGCTTGATTGCAGGAAATCCACAAGATTGGCAACTCTTTTGGACGAGTCGATTACCACGCCTGATGGCGATTG
TTGTTGCAGGTGCTGGGTTAAGTGTCTGCGGTTTAATTATGCAGTCATTAAGTCGAAATCGCTTTGTTTCACCAACCACA
GCGGGTTTATATGACTGTGCACGGCTGGGCGTTTTAATTTCGATTATTTTGCTTCCAAGTGCTTCTATTTTTGCCAAAAC
TGGATTTGCGATTATTGTCACGCTGATTGGTGCGATGACATTTATGAGTATTCTTGCCACTTTAAAGCACCGAGATACGG
TATTTGTGCCACTCGTTGGGATGATTTTTGGCAGCATTATTTCTGCATTTACGACTTTTATTGCTTTGCAACTTGATTTG
TTGCAGAACTTAGCAGGGTGGTTGCAAGGGGATTTCTCAACCATTTTGAATGGTCAATATGAATTGATTTATTTAAGTAT
TCCCGTTCTTGCATTGATTTATATATTTGCCAATCGTTTTGTCTTGGCAGGCTTGGGTGAAGACTTTGCGACAAATCTAG
GTTTGAACTATAAACAGACACTTTTCTTAGGTCTGCTGCTGGTCTCAGTGATTACTGGTGTGGTGATTGTGACTGTCGGT
GCAATTCCTTTTCTCGGTTTAATTGTGCCAAATCTAGTCAGCCTTTATTTAGGTGATCATATTCGCAAGACGCTTTCACA
TACGGCACTGCTTGGTGCATTGCTGGTCTTACTGTGTGATGTTTTTGGTCGAGTGGTGATTTATCCGTATGAGGTTTCGG
TCAGCCTGATTATGGGGGTGGTTGGTAGTGTGATTTTCCTGTGGTTATTACTCAGGAGATATCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

98.738

0.489

Multiple sequence alignment