Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   AhaeAN4_RS16085 Genome accession   NZ_CP031979
Coordinates   3303096..3304247 (+) Length   383 a.a.
NCBI ID   WP_005092484.1    Uniprot ID   A0A372MNT8
Organism   Acinetobacter haemolyticus strain AN4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3298096..3309247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN4_RS16065 (AhaeAN4_16165) - 3299009..3299767 (+) 759 WP_017394896.1 hypothetical protein -
  AhaeAN4_RS16070 (AhaeAN4_16170) - 3299812..3301908 (-) 2097 WP_115736206.1 TonB-dependent copper receptor -
  AhaeAN4_RS16075 (AhaeAN4_16175) - 3301982..3302419 (-) 438 WP_004637503.1 DUF2946 family protein -
  AhaeAN4_RS16080 (AhaeAN4_16180) def 3302440..3302970 (-) 531 WP_004637502.1 peptide deformylase -
  AhaeAN4_RS16085 (AhaeAN4_16185) tsaP 3303096..3304247 (+) 1152 WP_005092484.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AhaeAN4_RS16090 (AhaeAN4_16190) dprA 3304259..3305389 (+) 1131 WP_115736207.1 DNA-processing protein DprA Machinery gene
  AhaeAN4_RS16095 (AhaeAN4_16195) - 3305427..3305996 (+) 570 WP_005085670.1 Sua5/YciO/YrdC/YwlC family protein -
  AhaeAN4_RS16100 (AhaeAN4_16200) - 3306372..3307292 (-) 921 WP_005085672.1 DMT family transporter -
  AhaeAN4_RS16105 (AhaeAN4_16205) - 3307395..3308042 (-) 648 WP_017396658.1 TetR/AcrR family transcriptional regulator -
  AhaeAN4_RS16110 (AhaeAN4_16210) - 3308189..3308890 (-) 702 WP_004678526.1 IS1-like element ISPa14 family transposase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41721.84 Da        Isoelectric Point: 9.4255

>NTDB_id=313107 AhaeAN4_RS16085 WP_005092484.1 3303096..3304247(+) (tsaP) [Acinetobacter haemolyticus strain AN4]
MKKVLNGIQSFHALGLKKQLIAAAICAGLGMSVNLAHAASPNVSPPSVKVGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLVGKDEGDGCAGIIRRYTGNTSTLRPQVRVEALNNSIPVIPLAHIQQWLER
TSVLPADAIAHTPYILGTADQRVLAGKGQRVYVRGNGIENGQRYGVFREGEPYTILDEHGKKQVLGVELTQVASGVAIST
EKDITTVELTDSYNGEVRRGDRVMPEQDAMLPTLFYPTDANQVTDGGKIIRVMGSIGTAAKNGVVTVDRGTADGIEIGQV
FNAYQDGETVKDPKTKENVKLPGQYVGSVMIFKSFDRISYAYVLESELPIKMGSSIKPPRLDN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=313107 AhaeAN4_RS16085 WP_005092484.1 3303096..3304247(+) (tsaP) [Acinetobacter haemolyticus strain AN4]
ATGAAAAAGGTTTTAAACGGCATACAATCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCCGCTGCAATATGTGC
AGGACTAGGCATGAGTGTCAATCTTGCACATGCTGCAAGTCCGAACGTTAGTCCACCCTCAGTAAAAGTGGGTGCACCAC
ACGTTTATGTGGTCAAAAAAGGCGATACGCTTTGGGACATTTCAGGTAAGTTTTTAAGCAAGCCTTGGCGTTGGCCTGAG
ATTTGGGCAAGCAATAAGCACGTTAAAAACCCACATTGGATCTATCCAGGCGATCGCTTATTGCTTTGTAGTTTGAATGG
CAAACCATTGGTGGGTAAAGATGAGGGAGATGGCTGTGCGGGTATTATTCGCCGTTATACAGGCAACACCTCAACATTAC
GCCCACAGGTGCGTGTCGAAGCACTCAACAATAGCATTCCAGTTATTCCATTGGCGCACATTCAACAATGGCTCGAGCGT
ACCTCGGTTCTTCCAGCTGATGCAATTGCGCATACACCTTATATCCTGGGTACAGCCGATCAACGTGTACTCGCTGGTAA
AGGTCAACGTGTTTATGTTCGCGGTAACGGTATTGAAAATGGTCAACGCTATGGCGTATTCCGTGAAGGTGAACCGTACA
CCATTCTTGATGAACATGGCAAAAAGCAGGTCCTTGGCGTTGAATTGACCCAAGTTGCTTCAGGTGTTGCTATTAGCACT
GAAAAGGATATTACCACTGTTGAGTTAACCGATAGTTATAACGGTGAAGTTCGTCGTGGTGATCGTGTCATGCCTGAACA
AGATGCCATGTTACCAACATTGTTCTACCCAACCGATGCAAATCAAGTCACTGATGGCGGTAAAATCATTCGTGTCATGG
GTTCAATTGGTACAGCCGCTAAAAATGGTGTTGTCACCGTTGATCGTGGTACAGCTGATGGAATCGAAATCGGACAAGTA
TTTAATGCTTATCAAGACGGTGAAACAGTTAAAGATCCGAAAACGAAAGAAAATGTCAAATTACCAGGACAGTATGTCGG
TAGTGTGATGATCTTTAAGAGCTTTGACCGTATCAGCTATGCGTATGTGCTTGAAAGTGAGTTACCAATAAAAATGGGCT
CAAGTATCAAACCACCTCGTTTAGATAACTAA

Domains


Predicted by InterproScan.

(56-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A372MNT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

72.135

100

0.723


Multiple sequence alignment