Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   AhaeAN4_RS02755 Genome accession   NZ_CP031979
Coordinates   562107..562991 (+) Length   294 a.a.
NCBI ID   WP_008942322.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain AN4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 557107..567991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN4_RS02730 (AhaeAN4_02775) - 557979..558488 (-) 510 WP_004637828.1 dihydrofolate reductase -
  AhaeAN4_RS02735 (AhaeAN4_02780) thyA 558509..559351 (-) 843 WP_005083621.1 thymidylate synthase -
  AhaeAN4_RS02740 (AhaeAN4_02785) - 559556..560131 (-) 576 WP_004637831.1 xanthine phosphoribosyltransferase -
  AhaeAN4_RS02745 (AhaeAN4_02790) - 560276..560992 (-) 717 WP_004637832.1 DUF3108 domain-containing protein -
  AhaeAN4_RS02750 (AhaeAN4_02795) - 561187..561870 (-) 684 WP_004637833.1 hypothetical protein -
  AhaeAN4_RS02755 (AhaeAN4_02800) tonB2 562107..562991 (+) 885 WP_008942322.1 energy transducer TonB Machinery gene
  AhaeAN4_RS02760 (AhaeAN4_02805) - 563261..565420 (+) 2160 WP_005088153.1 TonB-dependent siderophore receptor -
  AhaeAN4_RS02765 (AhaeAN4_02810) - 565491..565790 (-) 300 WP_005088154.1 antibiotic biosynthesis monooxygenase family protein -
  AhaeAN4_RS02770 (AhaeAN4_02815) ybeY 565802..566287 (-) 486 WP_005088155.1 rRNA maturation RNase YbeY -
  AhaeAN4_RS02775 (AhaeAN4_02820) - 566306..567385 (-) 1080 WP_017394568.1 PhoH family protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33521.00 Da        Isoelectric Point: 6.8580

>NTDB_id=313081 AhaeAN4_RS02755 WP_008942322.1 562107..562991(+) (tonB2) [Acinetobacter haemolyticus strain AN4]
MWNKINFRTQMTSFWWQDPIFVGAVVIAVMVHGLVLTTQFSMPSPTDTSTKEIAVSVRPSQDKVEHADFLAQTDQQGSGE
FHQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERKKALEELQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHPILDEAARASVRRGAPFGAFDSSMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=313081 AhaeAN4_RS02755 WP_008942322.1 562107..562991(+) (tonB2) [Acinetobacter haemolyticus strain AN4]
ATGTGGAATAAAATAAATTTTCGTACTCAAATGACTTCCTTTTGGTGGCAAGATCCGATTTTTGTTGGAGCAGTTGTTAT
TGCAGTCATGGTACATGGCCTCGTACTGACAACACAATTTTCGATGCCGTCACCTACTGATACATCAACCAAAGAAATCG
CCGTGTCTGTACGTCCAAGTCAAGATAAGGTCGAGCATGCAGATTTTTTAGCGCAAACTGATCAACAAGGATCAGGTGAA
TTTCATCAAGCACATCGTATGTCTAGTGATATGCCCACGCCAATGCAAAGTGATGCAACCACAGGAGAGCATGAGCTAGA
AAGTCTCGAAACCATACAACAGAAGCGTGAACTCCTCTTTGAGGAAAAAGTGTTAATGACAGTGTTAAGTTGGCAAAAGC
AAGCTGAACAGAATGAACGTAAGAAAGCATTAGAAGAATTACAAAGTCAATTTCAAGCCAAAGCTGCGATGGTGGCAAGT
TTAGAAGCGCAATATTTACAACGCCAACAAAATTTTAGCCGTAAGCAACGTATTAAAACGGTTGATGGGATACAAGCGAA
ACAAGATGCATCGGCAGCATATCTCGATAAATTCCGACAAAAAGTTGAGTTGTATGGCAATCGTTATTATCCCGATGCGG
CAAAACAGCAACGCTTAGCGGGTGAAGTACGTTTAATGGTGATTTTAAATGCGCAAGGCGGTATCCGAGCCATTCGTTTA
ATTGAGAGCTCAGGACATCCGATTTTGGATGAAGCAGCTCGTGCTTCTGTTCGCCGTGGTGCACCATTTGGAGCTTTTGA
CAGCAGTATGAAAGATATTTCTGAGTTACGGATTATCCGAACATGGCGTTTTGATCCAGTGGATGCTGAATTTGAAGTGC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.15

100

0.742

Multiple sequence alignment