Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AhaeAN43_RS14510 Genome accession   NZ_CP031976
Coordinates   3051589..3053814 (+) Length   741 a.a.
NCBI ID   WP_151800428.1    Uniprot ID   A0A857INE7
Organism   Acinetobacter haemolyticus strain AN43     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3046589..3058814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN43_RS14490 (AhaeAN43_14635) lnt 3047416..3048975 (+) 1560 WP_005088063.1 apolipoprotein N-acyltransferase -
  AhaeAN43_RS14495 (AhaeAN43_14640) - 3049097..3049441 (-) 345 WP_005088060.1 hypothetical protein -
  AhaeAN43_RS14500 (AhaeAN43_14645) gspG 3049705..3050235 (-) 531 WP_005088059.1 type II secretion system major pseudopilin GspG -
  AhaeAN43_RS14505 (AhaeAN43_14650) gspF 3050235..3051440 (-) 1206 WP_005088056.1 type II secretion system inner membrane protein GspF -
  AhaeAN43_RS14510 (AhaeAN43_14655) priA 3051589..3053814 (+) 2226 WP_151800428.1 primosomal protein N' Machinery gene
  AhaeAN43_RS14515 (AhaeAN43_14660) - 3053855..3055672 (+) 1818 WP_005088050.1 cation:proton antiporter -
  AhaeAN43_RS14520 (AhaeAN43_14665) - 3055781..3056653 (+) 873 WP_005083783.1 Hsp33 family molecular chaperone HslO -
  AhaeAN43_RS14525 (AhaeAN43_14670) - 3056763..3057113 (-) 351 WP_004637729.1 hypothetical protein -
  AhaeAN43_RS14530 (AhaeAN43_14675) - 3057277..3058236 (+) 960 WP_005088047.1 DnaJ C-terminal domain-containing protein -
  AhaeAN43_RS14535 (AhaeAN43_14680) - 3058248..3058574 (+) 327 WP_004637727.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84222.26 Da        Isoelectric Point: 8.7532

>NTDB_id=313058 AhaeAN43_RS14510 WP_151800428.1 3051589..3053814(+) (priA) [Acinetobacter haemolyticus strain AN43]
MPSENSNAILYRIRVALPVYVYDTFDYTVSAEQYQQAQIGARVAVSFGRQNLVGIIVEKIDPNQVFTGQFKLKAITELLD
KEAILDQHVLTLMTWSAQYYQFPIGEVMQSALPTLLRQGRALDILFHLWKIVPNDDPNALLKRSPKQYGAYQILKIHPHG
TTENVLNLSGVETATLKALEKKGLVECCLEPHDFSPTPVQLAQVPLTANEDQKRAIQQILKEQHHYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTVARFKSRFHCDIALLHSGLNDSKRLQAWQHAQTGKASIVIGTRSAIYTPL
PHLGLIILDEEHDLSYKQQEGFRYHTRDVALYRGYLQHCPVILGSATPSIDSYHLVESGKLHLLELNQRAGVAVLPKMHV
IDLKIAKKKHGISQNLIEQIKLTLERKEQVLIFLNRRGYAPILMCESCGWQANCPHCDAHFTLHSQPYHYLHCHHCGTIN
RLPDHCPACQKQSLKTIGAGTAKLEEHLQELFPHNEVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFPH
VTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGNVYLQSLRPDHPMLTTLIEHDYRTVAKQMLAERKLAML
PPYRYTVLVRVESKDREYSQNFLADIAQQLRTMAGDLVDIWGPIPAPMERKAGRYRAHMVILSADRAKLHFYLRQWWQQV
VHLPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=313058 AhaeAN43_RS14510 WP_151800428.1 3051589..3053814(+) (priA) [Acinetobacter haemolyticus strain AN43]
ATGCCTAGCGAAAATTCTAACGCCATTTTGTACCGTATTCGAGTTGCCCTACCCGTATATGTGTATGACACGTTTGACTA
TACGGTCAGTGCCGAACAGTATCAACAAGCACAGATTGGAGCGCGTGTTGCAGTGTCGTTTGGACGACAAAATCTCGTAG
GTATCATTGTTGAAAAAATTGATCCTAATCAAGTTTTCACAGGTCAATTTAAACTGAAAGCAATTACTGAATTACTTGAT
AAAGAAGCAATATTAGATCAACACGTTTTAACTTTGATGACATGGTCTGCTCAGTATTATCAATTCCCAATTGGCGAAGT
GATGCAAAGTGCCCTCCCCACACTACTCAGACAAGGGCGTGCATTAGACATTTTATTTCATCTGTGGAAAATCGTGCCAA
ATGATGATCCGAATGCATTATTGAAACGCTCTCCAAAACAATATGGGGCGTATCAAATCTTAAAAATACATCCTCATGGC
ACAACTGAAAATGTCTTGAACCTCAGTGGTGTTGAAACTGCAACACTGAAAGCTTTAGAAAAGAAAGGGTTGGTTGAGTG
TTGTCTGGAACCGCATGATTTTAGCCCCACACCTGTACAATTGGCGCAAGTACCACTCACAGCCAACGAGGATCAAAAAA
GAGCGATCCAACAAATCCTCAAAGAGCAGCATCATTACCAAGCATTTTTACTAGATGGCTTAACAGGCAGTGGCAAAACT
GAAGTTTATCTGCAAGTCATGCATGAAGTATTAAAGCAGGGTAAGCAGGTGTTGGTACTGGTTCCGGAAATCGGTCTTAC
CCCTCAAACTGTCGCTCGCTTTAAATCACGGTTTCATTGTGATATTGCTTTATTACATTCAGGTTTAAATGACTCGAAGC
GCTTACAAGCATGGCAACACGCACAAACAGGAAAAGCTTCGATTGTGATCGGGACTCGTTCTGCGATCTACACGCCGCTT
CCTCATCTCGGACTGATTATCCTCGATGAAGAGCATGATCTTTCTTATAAACAGCAAGAAGGCTTTCGGTATCATACCCG
TGATGTAGCGCTCTACAGAGGATACTTACAACATTGTCCTGTGATTCTTGGATCTGCAACACCGAGTATCGATAGCTATC
ATCTGGTCGAGTCAGGCAAACTACATCTACTGGAACTCAATCAACGTGCTGGCGTCGCTGTACTGCCTAAAATGCATGTG
ATTGATTTAAAAATTGCCAAGAAAAAACATGGTATCAGCCAAAATTTAATTGAGCAGATCAAACTCACCTTAGAACGCAA
AGAACAGGTGTTGATCTTTCTCAACCGTCGGGGCTATGCACCGATTCTGATGTGTGAAAGTTGTGGTTGGCAAGCCAATT
GCCCCCATTGTGATGCGCATTTCACCCTTCATTCTCAGCCTTATCATTATTTACATTGTCATCATTGCGGCACCATCAAT
CGCCTCCCCGATCATTGCCCAGCATGCCAAAAACAAAGTTTAAAAACGATTGGCGCTGGAACGGCAAAACTTGAAGAGCA
TTTACAAGAGTTATTTCCTCACAATGAAGTGATTCGAGTTGATCGTGACAGTACCAGCCGTGTCGGAAGTTGGCAGAAAA
TTTATGACCGTATCCAACAAAATAAACCGAGTATTTTATTGGGCACACAAATGCTTGCTAAAGGACATCATTTCCCACAT
GTAACTTTGGTGGCTATTTTAGATATTGACGCTGGTTTACTGAGCGTGGATATCCGCGCCCCTGAACGTACCGCACAATT
AATAGTACAAGTGGCCGGACGCGCTGGACGAGGCGAACATAAAGGGAATGTCTATTTACAAAGTCTTCGCCCTGATCATC
CTATGCTCACCACATTAATTGAACATGACTATCGTACGGTTGCCAAACAAATGCTGGCTGAGCGTAAACTTGCAATGCTC
CCTCCATATCGTTATACAGTATTGGTACGTGTTGAATCGAAAGATCGAGAATATAGCCAGAACTTTTTGGCGGATATTGC
GCAACAACTGAGAACAATGGCTGGCGATTTAGTTGATATTTGGGGGCCAATTCCCGCACCGATGGAACGTAAAGCTGGAC
GTTATCGTGCCCACATGGTGATTTTGTCGGCCGATCGCGCCAAACTGCATTTTTATTTGCGTCAATGGTGGCAACAAGTG
GTACATTTACCTCGTCAGCACCAACTCAGGCTATCCATCGATGTTGATCCACAAGAGTTTAGTTAG

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(14-113)

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

DEAD/DEAH box helicase (DEAD)

(210-371)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A857INE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

82.177

99.19

0.815

Multiple sequence alignment