Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   D1O36_RS07890 Genome accession   NZ_CP031881
Coordinates   1463857..1464588 (-) Length   243 a.a.
NCBI ID   WP_084829044.1    Uniprot ID   A0A0E2QFV4
Organism   Streptococcus thermophilus strain ST106     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1458857..1469588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1O36_RS07865 (D1O36_07895) - 1459921..1461102 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  D1O36_RS07875 (D1O36_07905) trmB 1461323..1461964 (-) 642 WP_046206494.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  D1O36_RS07880 (D1O36_07910) - 1461974..1462765 (-) 792 WP_002951667.1 phosphotransferase family protein -
  D1O36_RS07885 (D1O36_07915) pptB 1462823..1463860 (-) 1038 WP_023909891.1 ABC transporter permease Regulator
  D1O36_RS07890 (D1O36_07920) pptA 1463857..1464588 (-) 732 WP_084829044.1 ABC transporter ATP-binding protein Regulator
  D1O36_RS07895 (D1O36_07925) - 1464653..1465072 (+) 420 WP_084829045.1 HIT family protein -
  D1O36_RS07900 (D1O36_07930) - 1465069..1465368 (+) 300 WP_084829809.1 hypothetical protein -
  D1O36_RS07905 (D1O36_07935) - 1465419..1466147 (-) 729 WP_134973435.1 hypothetical protein -
  D1O36_RS07910 (D1O36_07940) - 1466163..1466756 (-) 594 WP_134973437.1 DUF4230 domain-containing protein -
  D1O36_RS11100 - 1466815..1466940 (-) 126 WP_011681534.1 hypothetical protein -
  D1O36_RS07915 (D1O36_07945) - 1467351..1469456 (-) 2106 WP_134973439.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26800.96 Da        Isoelectric Point: 4.4600

>NTDB_id=312349 D1O36_RS07890 WP_084829044.1 1463857..1464588(-) (pptA) [Streptococcus thermophilus strain ST106]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIVIDGLSIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMAHADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQVLAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=312349 D1O36_RS07890 WP_084829044.1 1463857..1464588(-) (pptA) [Streptococcus thermophilus strain ST106]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTATGCCAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTAGTTGGCCTTATTGGTCTCAATGGTGCCGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTGACACCCT
ACGGGGGACAGATTGTTATTGATGGTTTGAGCATACAGCAAGATTCGGCTAGCTACCGTCAAAAGATTGGCTACATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACTGTGCTTATGGCATATGGCCTTGATGTTAC
AGAAGGAATGGCACATGCAGACAAGTACCTCAAACTTTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGCGCCTTTATTGTCAACCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGTTTTGTGATTTTGCACCATGGACAGGTCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2QFV4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

97.942

100

0.979
  pptA Streptococcus salivarius strain HSISS4

95.885

100

0.959

Multiple sequence alignment