Detailed information NTG0312337

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: D1O36_RS05655
• Genome accession: NZ_CP031881
• Coordinates: 1031523..1032404 (-)
• Length: 293 a.a.
• NCBI ID: WP_111679622.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ST106
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1026523..1037404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1O36_RS05630 (D1O36_05660)	vicR	1027228..1027935 (-)	708	WP_011681206.1	response regulator YycF	Regulator
D1O36_RS05635 (D1O36_05665)	-	1028462..1029229 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
D1O36_RS05640 (D1O36_05670)	-	1029241..1030074 (+)	834	WP_134973271.1	transporter substrate-binding domain-containing protein	-
D1O36_RS05645 (D1O36_05675)	-	1030092..1030790 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
D1O36_RS05650 (D1O36_05680)	-	1030802..1031452 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
D1O36_RS05655 (D1O36_05685)	endA	1031523..1032404 (-)	882	WP_111679622.1	DNA/RNA non-specific endonuclease	Machinery gene
D1O36_RS05660 (D1O36_05690)	-	1032466..1032654 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
D1O36_RS05665 (D1O36_05695)	murA	1032656..1033927 (-)	1272	WP_134973272.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
D1O36_RS05670 (D1O36_05700)	-	1033997..1034233 (-)	237	WP_002946959.1	DUF1146 family protein	-
D1O36_RS05675 (D1O36_05705)	galE	1034422..1035435 (-)	1014	WP_014621668.1	UDP-glucose 4-epimerase GalE	-
D1O36_RS05680 (D1O36_05710)	-	1035450..1035911 (-)	462	WP_246752656.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31789.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=312337 D1O36_RS05655 WP_111679622.1 1031523..1032404(-) (endA) [Streptococcus thermophilus strain ST106]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=312337 D1O36_RS05655 WP_111679622.1 1031523..1032404(-) (endA) [Streptococcus thermophilus strain ST106]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGTCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.385	81.57	0.59
endA	Streptococcus pneumoniae D39	72.385	81.57	0.59
endA	Streptococcus pneumoniae R6	72.385	81.57	0.59
endA	Streptococcus pneumoniae TIGR4	72.385	81.57	0.59