Detailed information NTG0031206

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NGK_RS00285
• Genome accession: NC_011035
• Coordinates: 53684..56851 (-)
• Length: 1055 a.a.
• NCBI ID: WP_012503341.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae NCCP11945
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48684..61851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NGK_RS00255 (NGK_0065)	-	49716..50105 (-)	390	WP_003687278.1	DUF559 domain-containing protein	-
NGK_RS00265	-	50268..50647 (-)	380	Protein_49	VOC family protein	-
NGK_RS00270 (NGK_0067)	carA	50701..51834 (-)	1134	WP_003694721.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
NGK_RS00275	-	52549..52833 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
NGK_RS00285 (NGK_0074)	pilC	53684..56851 (-)	3168	WP_012503341.1	PilC family type IV pilus tip adhesin	Machinery gene
NGK_RS00295 (NGK_0079)	apbC	59171..60250 (-)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
NGK_RS00305 (NGK_0080)	-	60624..61133 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-

Sequence

Protein

• Length: 1055 a.a.
• Molecular weight: 116325.41 Da
• Isoelectric Point: 9.9266

>NTDB_id=31206 NGK_RS00285 WP_012503341.1 53684..56851(-) (pilC) [Neisseria gonorrhoeae NCCP11945]
MNKTLKRRVFRHTALYAAILMFSHTGGGGTQAQTRKYAIIMNERKQPEVKWEGQYSQSTLKDKGRERTFSHTSQRNWNGQ
QNNFISFNNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAAGWIRTTRPGLAGYAYTGIRCGHARDCPKLT
YKTRFSFDNPDLAKTGGRLDRHTESSRENSPIYKLKDYPWLGVSFNLGAEGTAKDGRSSSRLISSFDENNSNSNQNLVYT
TEGRDISLGNWQSESTAVAYYLNAKLHLLDKKKIKDITGKTVQLGVLKPSIDVKTQNTGFAGLLNFWSKWDIKDNGQIPV
KLGLPEVKAGRCTNKPNPNNNTKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPGSSSSRIFLQELKTQTDPARPGRHS
LAALNARDIKSREPNFNSRQTVIRLPGGVYRIAPTRDRIVGLNGNDGKNDTFGIYKERLVTPDADEWAKVLLPWTVRYYG
NDDIFKTFNQPNNKKQSDKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPIVAVDGYLATSANDGMVHLFKRNGTDQRGYEL
KLSYIPGTMPRQYFDNDTSALQDSDLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDKQKHFFMFGAMGLGGRGAYAL
DLSKIDSSNLTGVSMFDVQNDKNNNKNDNNRVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDINSNDNKTALYVYDLEN
GSGSLIKKIEAPSGKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDSNPSKWSVSTIFEGQRPITSAPAVSRLAD
KRVVIFGTGSDLSESDVFNTDEQYIYGIFDDDKANVSVKVKDHMGDGLLKQNLTQENKTLFLTNNKASGGSADKGWVVKL
REGERVTVKPTVVLRTAFVTIRSYTGNDKCGAQTAILGINTADGGALTPRSARPIVPDHNSVAQYSGHKKTSKGKSIPIG
CMEKGGKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITG
PMCGIKRLSWREVFF

Nucleotide

• Length: 3168 bp

>NTDB_id=31206 NGK_RS00285 WP_012503341.1 53684..56851(-) (pilC) [Neisseria gonorrhoeae NCCP11945]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGACGCAGGCGCAAACCCGTAAATACGCTATTATCATGAACGAGCGAAAGCAGCCCGAGGTAAAGTGGGAGGGTC
AATATAGTCAATCAACATTAAAGGACAAAGGCAGGGAGCGGACATTTAGCCATACGAGCCAGAGAAACTGGAACGGCCAA
CAAAACAATTTTATCTCATTCAACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGTCTGAAAGGGCGCGCCAATGCCGCCGGTTGGATTC
GTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGGTATCCGTTGCGGACATGCCCGAGACTGTCCCAAACTTACC
TATAAAACCCGATTTTCCTTCGATAATCCCGACTTGGCAAAAACAGGAGGCAGGCTGGATAGGCACACAGAGTCAAGCCG
CGAAAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCA
AAGATGGCAGATCATCCAGCAGATTGATATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTCTATACC
ACGGAAGGCCGCGATATTTCCTTGGGCAACTGGCAGAGCGAAAGTACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCA
CCTGCTGGACAAAAAAAAGATTAAAGATATCACCGGCAAAACAGTGCAGTTGGGTGTCTTGAAGCCGAGCATCGATGTGA
AGACACAAAATACGGGGTTTGCCGGCTTGCTAAATTTTTGGTCTAAGTGGGACATTAAAGATAACGGGCAGATTCCGGTC
AAGCTCGGCCTGCCGGAAGTCAAAGCCGGGCGCTGCACCAACAAACCGAACCCCAATAATAATACCAAAGCCCCTTCGCC
GGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCT
ACCCCGGCAGCTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGACCCCGCCCGGCCCGGCCGGCATTCC
CTCGCCGCTTTGAATGCGCGGGATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTGATCCGATTGCCGGG
CGGCGTGTACCGGATCGCCCCGACTCGCGACAGGATCGTGGGTTTGAATGGCAATGACGGCAAAAACGACACTTTCGGCA
TCTACAAGGAAAGGTTAGTCACACCTGATGCCGACGAGTGGGCAAAAGTGCTGCTGCCTTGGACGGTCCGGTATTACGGT
AATGACGATATATTTAAAACATTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATACAGCCAAAAATACCG
CATCCGCACAAAAGAAGATGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGACG
GGTATTTGGCAACTTCTGCCAACGACGGGATGGTGCACCTGTTTAAAAGAAACGGCACAGACCAACGAGGCTACGAACTG
AAGCTCAGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATAACGACACTTCCGCTCTCCAAGACTCCGACCTCGC
CAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCA
TTACAGATGACCAAGACAAGCAAAAACATTTCTTTATGTTTGGTGCGATGGGCCTGGGCGGCAGAGGCGCGTATGCCTTG
GATTTAAGCAAAATCGACAGCAGCAACCTGACCGGCGTTTCCATGTTTGATGTCCAAAACGACAAAAATAACAATAAGAA
TGACAATAATCGCGTGAAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCT
TCCTCGCCTCCGGTTATGCGGCTAAAGACATTAACAGCAACGACAATAAAACCGCGCTGTATGTGTATGATTTGGAAAAC
GGCAGTGGTAGTCTGATTAAAAAAATCGAAGCACCCAGCGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGA
TTTGGACGGCACAGTCGATATCGCCTATGCCGGCGACCGGGGCGGGAATATGTACCGCTTTGATTTGAGCGATTCCAATC
CTAGTAAATGGTCTGTAAGCACTATTTTCGAAGGCCAGAGGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGAC
AAACGCGTCGTTATCTTCGGTACGGGCAGCGATTTGAGTGAAAGTGACGTATTCAATACGGACGAACAATATATTTACGG
TATCTTTGACGACGATAAGGCGAATGTTAGTGTAAAGGTAAAAGACCACATGGGCGACGGGCTGCTCAAGCAAAACCTTA
CGCAGGAAAATAAAACCTTGTTCCTGACAAATAATAAGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTG
AGGGAAGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTCACCATCCGCAGCTATACGGGTAA
TGACAAATGCGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCC
CGATTGTGCCGGATCACAATTCGGTTGCGCAATATTCCGGCCATAAGAAAACCTCCAAAGGCAAATCCATCCCTATAGGT
TGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGCTACCTGGACGA
AAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCG
CCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGC
CCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (535-866)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	69.238	100	0.698