Detailed information NTG0311814

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D1J34_RS08485
• Genome accession: NZ_CP031845
• Coordinates: 1785150..1786253 (-)
• Length: 367 a.a.
• NCBI ID: WP_049334427.1
• Uniprot ID: A0AAP3EVI0
• Organism: Riemerella anatipestifer strain RCAD0392
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1780150..1791253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1J34_RS08460 (D1J34_08530)	comF	1781345..1781998 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
D1J34_RS08470 (D1J34_08540)	-	1782220..1782771 (-)	552	WP_004918080.1	hypothetical protein	-
D1J34_RS08475 (D1J34_08545)	-	1782826..1783476 (-)	651	WP_004918082.1	HD domain-containing protein	-
D1J34_RS08480 (D1J34_08550)	gdhA	1783608..1784966 (-)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
D1J34_RS08485 (D1J34_08555)	dprA	1785150..1786253 (-)	1104	WP_049334427.1	DNA-processing protein DprA	Machinery gene
D1J34_RS08490 (D1J34_08560)	-	1786256..1786633 (-)	378	WP_049334428.1	group III truncated hemoglobin	-
D1J34_RS08495 (D1J34_08565)	ruvC	1786644..1787198 (-)	555	WP_049334429.1	crossover junction endodeoxyribonuclease RuvC	-
D1J34_RS08500 (D1J34_08570)	-	1787222..1788412 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
D1J34_RS08505 (D1J34_08575)	-	1788442..1788915 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40371.22 Da
• Isoelectric Point: 6.3958

>NTDB_id=311814 D1J34_RS08485 WP_049334427.1 1785150..1786253(-) (dprA) [Riemerella anatipestifer strain RCAD0392]
MVNAEEILYSIALRRSSLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=311814 D1J34_RS08485 WP_049334427.1 1785150..1786253(-) (dprA) [Riemerella anatipestifer strain RCAD0392]
ATGGTAAATGCAGAAGAAATTTTATACTCTATTGCTTTACGGCGAAGCTCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTGAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACACATTGTTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.005	100	0.94