Detailed information NTG0031167

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QU43_RS40520
• Genome accession: NC_011000
• Coordinates: 866125..867285 (-)
• Length: 386 a.a.
• NCBI ID: WP_006483736.1
• Uniprot ID: B4EAQ6
• Organism: Burkholderia cenocepacia J2315
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 861125..872285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU43_RS40500 (BCAL0789)	-	861699..862082 (+)	384	WP_006483747.1	nuclear transport factor 2 family protein	-
QU43_RS40505 (BCAL0790)	leuA	862226..863872 (-)	1647	WP_006483729.1	2-isopropylmalate synthase	-
QU43_RS40510 (BCAL0791)	ybiB	864241..865215 (-)	975	WP_006483732.1	DNA-binding protein YbiB	-
QU43_RS40515 (BCAL0792)	maiA	865395..866039 (+)	645	WP_006499022.1	maleylacetoacetate isomerase	-
QU43_RS40520 (BCAL0793)	pilA	866125..867285 (-)	1161	WP_006483736.1	signal recognition particle-docking protein FtsY	Machinery gene
QU43_RS40525 (BCAL0794)	rsmD	867502..868116 (+)	615	WP_006483748.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QU43_RS40530 (BCAL0795)	coaD	868228..868725 (+)	498	WP_006477773.1	pantetheine-phosphate adenylyltransferase	-
QU43_RS40535 (BCAL0796)	-	868785..869051 (+)	267	WP_006483745.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QU43_RS40540 (BCAL0797)	hisC	869129..870196 (-)	1068	WP_006483731.1	histidinol-phosphate transaminase	-
QU43_RS40545 (BCAL0798)	pth	870313..870912 (-)	600	WP_006477776.1	aminoacyl-tRNA hydrolase	-
QU43_RS40550 (BCAL0799)	-	871033..871638 (-)	606	WP_006483734.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 40953.90 Da
• Isoelectric Point: 4.7940

>NTDB_id=31167 QU43_RS40520 WP_006483736.1 866125..867285(-) (pilA) [Burkholderia cenocepacia J2315]
MFSFFKRFKKTQEPDPAESQSADAQQADEASDADAPVLDAPPAASVPPAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVP
PPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQV
KAALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1161 bp

>NTDB_id=31167 QU43_RS40520 WP_006483736.1 866125..867285(-) (pilA) [Burkholderia cenocepacia J2315]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCCGACGCGCCCGTGCTCGACGCGCCGCCCGCGGCCAGCGTGCCGCCAGCGCCCGCGCAACCGG
CTGCGCCGGCCGTCGTGATGACCGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTGCCG
CCGCCGCTGCAGGACGCGTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAGACGGGGCTCGCGAAGACGGGCTCGAGCAT
CACCGGCGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGG
GCGTCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAGCAGGTG
AAGGCTGCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCT
CGTGATGATGATCACCGGCGTGAACGGCGCAGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCACCTGCAGAGCTTCG
ACCAGTCGGTGCTGCTGGCTGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAAC
AACGTGACGGTCGTGCAGCAGGAGAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCATCTGATGGAGGAGCTGAAGAAGGTGAAGC
GCGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTC
ACGCAGGTGAAGGCCTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGG
GATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (187-386)

• SRP54-type protein, helical bundle domain (SRP54_N) (104-166)

3D structure

• AlphaFold DB: B4EAQ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.578