Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   D0819_RS21410 Genome accession   NZ_CP031784
Coordinates   4152411..4153205 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain HMNig-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 4147411..4158205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0819_RS21380 (D0819_21480) sxzA 4148250..4149281 (+) 1032 WP_153257342.1 iron ABC transporter permease -
  D0819_RS21385 (D0819_21485) yfhB 4149396..4150277 (+) 882 WP_038829483.1 PhzF family phenazine biosynthesis isomerase -
  D0819_RS21390 (D0819_21490) yfhC 4150365..4150949 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  D0819_RS21395 (D0819_21495) yfhD 4150988..4151179 (-) 192 WP_003233561.1 YfhD family protein -
  D0819_RS21400 (D0819_21500) yfhE 4151246..4151356 (-) 111 WP_003223230.1 YfhE family protein -
  D0819_RS21405 (D0819_21505) yfhF 4151411..4152322 (-) 912 WP_103803364.1 TIGR01777 family oxidoreductase -
  D0819_RS21410 (D0819_21510) recX 4152411..4153205 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  D0819_RS21415 (D0819_21515) yfhH 4153207..4153521 (+) 315 WP_003244592.1 YfhH family protein -
  D0819_RS21420 (D0819_21520) yfhI 4153664..4154857 (+) 1194 WP_021481165.1 MFS transporter -
  D0819_RS21425 (D0819_21525) sspK 4154889..4155041 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  D0819_RS21430 (D0819_21530) yfhJ 4155166..4155435 (+) 270 WP_003243789.1 YfhJ family protein -
  D0819_RS21435 (D0819_21535) yfhK 4155580..4156098 (+) 519 WP_153257343.1 SH3 domain-containing protein -
  D0819_RS21440 (D0819_21540) spdL 4156183..4156515 (+) 333 WP_049140590.1 SdpC immunity protein SpdL -
  D0819_RS21445 (D0819_21545) ephM 4156502..4157362 (+) 861 WP_153257344.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=311423 D0819_RS21410 WP_029726844.1 4152411..4153205(+) (recX) [Bacillus subtilis strain HMNig-2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=311423 D0819_RS21410 WP_029726844.1 4152411..4153205(+) (recX) [Bacillus subtilis strain HMNig-2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTGAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment