Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D0819_RS17125 | Genome accession | NZ_CP031784 |
| Coordinates | 3293166..3293456 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain HMNig-2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3288166..3298456
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0819_RS17085 (D0819_17160) | darA | 3288189..3288518 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| D0819_RS17090 (D0819_17165) | yaaR | 3288531..3288971 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| D0819_RS17095 (D0819_17170) | holB | 3288983..3289972 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| D0819_RS17100 (D0819_17175) | ricT | 3289975..3290802 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| D0819_RS17105 (D0819_17180) | yabA | 3290817..3291176 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D0819_RS17110 (D0819_17185) | trmNF | 3291235..3291978 (+) | 744 | WP_021479732.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D0819_RS17115 (D0819_17190) | yazA | 3291965..3292264 (+) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| D0819_RS17120 (D0819_17195) | rsmI | 3292239..3293117 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D0819_RS17125 (D0819_17200) | abrB | 3293166..3293456 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D0819_RS17130 (D0819_17205) | metG | 3293951..3295945 (+) | 1995 | WP_021479730.1 | methionine--tRNA ligase | - |
| D0819_RS17135 (D0819_17210) | dayD | 3296024..3296791 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| D0819_RS17140 (D0819_17215) | yabE | 3296947..3298260 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=311414 D0819_RS17125 WP_003226760.1 3293166..3293456(-) (abrB) [Bacillus subtilis strain HMNig-2]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=311414 D0819_RS17125 WP_003226760.1 3293166..3293456(-) (abrB) [Bacillus subtilis strain HMNig-2]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |