Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D0819_RS02995 Genome accession   NZ_CP031784
Coordinates   541696..542280 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain HMNig-2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 536696..547280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0819_RS02965 (D0819_02975) dapD 536884..537594 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D0819_RS02970 (D0819_02980) dapI 537664..538788 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  D0819_RS02975 (D0819_02985) ykuS 538850..539095 (+) 246 WP_003232382.1 YkuS family protein -
  D0819_RS02980 (D0819_02990) mscT 539132..539935 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  D0819_RS02985 (D0819_02995) ahpA 540172..540714 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  D0819_RS02990 (D0819_03000) ykuV 540785..541231 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  D0819_RS02995 (D0819_03005) rok 541696..542280 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  D0819_RS03000 (D0819_03010) cse15 542321..543286 (-) 966 WP_021479381.1 spore protein Cse15 -
  D0819_RS03005 (D0819_03015) mobA 543423..544022 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  D0819_RS03010 (D0819_03020) moeB 544073..545092 (+) 1020 WP_021479379.1 molybdopterin-synthase adenylyltransferase MoeB -
  D0819_RS03015 (D0819_03025) glp 545110..546402 (+) 1293 WP_153256729.1 gephyrin-like molybdotransferase Glp -
  D0819_RS03020 (D0819_03030) mobB 546363..546884 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=311360 D0819_RS02995 WP_014113628.1 541696..542280(+) (rok) [Bacillus subtilis strain HMNig-2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=311360 D0819_RS02995 WP_014113628.1 541696..542280(+) (rok) [Bacillus subtilis strain HMNig-2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment