Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   D0819_RS01415 Genome accession   NZ_CP031784
Coordinates   255365..255556 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain HMNig-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 250365..260556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0819_RS01385 (D0819_01385) argF 251229..252188 (+) 960 WP_046160277.1 ornithine carbamoyltransferase -
  D0819_RS01390 (D0819_01390) yjzC 252274..252453 (+) 180 WP_003245356.1 YjzC family protein -
  D0819_RS01395 (D0819_01395) yjzD 252499..252684 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  D0819_RS01400 (D0819_01400) - 252933..253667 (+) 735 WP_032721340.1 hypothetical protein -
  D0819_RS01405 (D0819_01405) - 253749..254306 (+) 558 WP_014476424.1 hypothetical protein -
  D0819_RS01410 (D0819_01410) med 254397..255350 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  D0819_RS01415 (D0819_01415) comZ 255365..255556 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  D0819_RS01420 (D0819_01420) yjzB 255586..255813 (-) 228 WP_120027973.1 spore coat protein YjzB -
  D0819_RS01425 (D0819_01425) fabH 255978..256916 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  D0819_RS01430 (D0819_01430) fabF 256939..258180 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  D0819_RS01435 (D0819_01435) yjaZ 258256..259041 (+) 786 WP_049140720.1 DUF2268 domain-containing protein -
  D0819_RS01440 (D0819_01440) appD 259233..260219 (+) 987 WP_049140721.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=311351 D0819_RS01415 WP_003224559.1 255365..255556(+) (comZ) [Bacillus subtilis strain HMNig-2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=311351 D0819_RS01415 WP_003224559.1 255365..255556(+) (comZ) [Bacillus subtilis strain HMNig-2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment