Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   D0808_RS07200 Genome accession   NZ_CP031783
Coordinates   1413965..1414759 (+) Length   264 a.a.
NCBI ID   WP_021481166.1    Uniprot ID   -
Organism   Bacillus subtilis strain MENO2 voucher National Research Centre     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 1408965..1419759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0808_RS07170 (D0808_07250) sxzA 1409804..1410835 (+) 1032 WP_153255822.1 iron ABC transporter permease -
  D0808_RS07175 (D0808_07255) yfhB 1410950..1411831 (+) 882 WP_015252519.1 PhzF family phenazine biosynthesis isomerase -
  D0808_RS07180 (D0808_07260) yfhC 1411919..1412503 (+) 585 WP_003243940.1 nitroreductase -
  D0808_RS07185 (D0808_07265) yfhD 1412542..1412733 (-) 192 WP_014479215.1 YfhD family protein -
  D0808_RS07190 (D0808_07270) yfhE 1412800..1412910 (-) 111 WP_003223230.1 YfhE family protein -
  D0808_RS07195 (D0808_07275) yfhF 1412965..1413876 (-) 912 WP_134156967.1 TIGR01777 family oxidoreductase -
  D0808_RS07200 (D0808_07280) recX 1413965..1414759 (+) 795 WP_021481166.1 recombination regulator RecX Regulator
  D0808_RS07205 (D0808_07285) yfhH 1414761..1415075 (+) 315 WP_024573179.1 YfhH family protein -
  D0808_RS07210 (D0808_07290) yfhI 1415218..1416411 (+) 1194 WP_072692836.1 MFS transporter -
  D0808_RS07215 (D0808_07295) sspK 1416443..1416595 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  D0808_RS07220 (D0808_07300) yfhJ 1416720..1416989 (+) 270 WP_003243789.1 YfhJ family protein -
  D0808_RS07225 (D0808_07305) yfhK 1417134..1417652 (+) 519 WP_153255823.1 SH3 domain-containing protein -
  D0808_RS07230 (D0808_07310) spdL 1417737..1418054 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  D0808_RS07235 (D0808_07315) ephM 1418056..1418916 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31025.29 Da        Isoelectric Point: 6.6686

>NTDB_id=311285 D0808_RS07200 WP_021481166.1 1413965..1414759(+) (recX) [Bacillus subtilis strain MENO2 voucher National Research Centre]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=311285 D0808_RS07200 WP_021481166.1 1413965..1414759(+) (recX) [Bacillus subtilis strain MENO2 voucher National Research Centre]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGTCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996


Multiple sequence alignment