Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D0808_RS02860 | Genome accession | NZ_CP031783 |
| Coordinates | 562809..563099 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain MENO2 voucher National Research Centre | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 557809..568099
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0808_RS02820 (D0808_02865) | darA | 557832..558161 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| D0808_RS02825 (D0808_02870) | yaaR | 558174..558614 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| D0808_RS02830 (D0808_02875) | holB | 558626..559615 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| D0808_RS02835 (D0808_02880) | ricT | 559618..560445 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| D0808_RS02840 (D0808_02885) | yabA | 560460..560819 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D0808_RS02845 (D0808_02890) | trmNF | 560878..561621 (+) | 744 | WP_021479732.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D0808_RS02850 (D0808_02895) | yazA | 561608..561907 (+) | 300 | WP_153255572.1 | GIY-YIG nuclease family protein | - |
| D0808_RS02855 (D0808_02900) | rsmI | 561882..562760 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D0808_RS02860 (D0808_02905) | abrB | 562809..563099 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D0808_RS02865 (D0808_02910) | metG | 563594..565588 (+) | 1995 | WP_153255573.1 | methionine--tRNA ligase | - |
| D0808_RS02870 (D0808_02915) | dayD | 565667..566434 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| D0808_RS02875 (D0808_02920) | yabE | 566590..567903 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=311275 D0808_RS02860 WP_003226760.1 562809..563099(-) (abrB) [Bacillus subtilis strain MENO2 voucher National Research Centre]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=311275 D0808_RS02860 WP_003226760.1 562809..563099(-) (abrB) [Bacillus subtilis strain MENO2 voucher National Research Centre]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |