Detailed information NTG0311263

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: D0853_RS21280
• Genome accession: NZ_CP031782
• Coordinates: 988891..989988 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain VPD14
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 983891..994988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0853_RS21265 (D0853_21305)	-	984556..985611 (-)	1056	WP_005477158.1	HlyD family secretion protein	-
D0853_RS21270 (D0853_21310)	-	985649..986104 (-)	456	WP_005477342.1	MarR family transcriptional regulator	-
D0853_RS21275 (D0853_21315)	luxQ	986315..988891 (-)	2577	WP_005477121.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
D0853_RS21280 (D0853_21320)	luxP	988891..989988 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
D0853_RS21285 (D0853_21325)	-	990341..990661 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
D0853_RS21290 (D0853_21330)	-	990658..991308 (-)	651	WP_005477153.1	YceH family protein	-
D0853_RS21295 (D0853_21335)	-	991485..991700 (-)	216	WP_005477197.1	hypothetical protein	-
D0853_RS21305 (D0853_21345)	-	992028..992342 (+)	315	WP_005453573.1	DUF496 family protein	-
D0853_RS21310 (D0853_21350)	-	992465..993802 (+)	1338	WP_005477179.1	MATE family efflux transporter	-
D0853_RS21315 (D0853_21355)	-	993873..994850 (-)	978	WP_005477354.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=311263 D0853_RS21280 WP_005463467.1 988891..989988(-) (luxP) [Vibrio parahaemolyticus strain VPD14]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=311263 D0853_RS21280 WP_005463467.1 988891..989988(-) (luxP) [Vibrio parahaemolyticus strain VPD14]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGAGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCGCTGTCTGAACTTGGCCGTGAAGACGTTATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATCAAATGGGATTTGGAAGGCAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644