Detailed information NTG0031109

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SSUBM407_RS05435
• Genome accession: NC_012926
• Coordinates: 1103277..1104347 (-)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis BM407
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1098277..1109347

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUBM407_RS05410 (SSUBM407_1018)	relB	1099489..1099740 (+)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-
SSUBM407_RS05415 (SSUBM407_1019)	-	1099724..1099981 (+)	258	WP_011922404.1	type II toxin-antitoxin system RelE family toxin	-
SSUBM407_RS05420 (SSUBM407_1020)	braR	1100020..1100685 (+)	666	WP_012775103.1	response regulator transcription factor	Regulator
SSUBM407_RS05425 (SSUBM407_1021)	-	1100682..1101623 (+)	942	WP_012775102.1	sensor histidine kinase	-
SSUBM407_RS05430 (SSUBM407_1022)	-	1101699..1103207 (+)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
SSUBM407_RS05435 (SSUBM407_1023)	xerS	1103277..1104347 (-)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
SSUBM407_RS10740 (SSUBM407_1024)	-	1104706..1105607 (-)	902	Protein_1035	Abi family protein	-
SSUBM407_RS05450 (SSUBM407_1025)	-	1106319..1106756 (-)	438	WP_011922397.1	AAA family ATPase	-
SSUBM407_RS05455 (SSUBM407_1026)	-	1106821..1107561 (-)	741	WP_011922396.1	DUF3307 domain-containing protein	-
SSUBM407_RS05460 (SSUBM407_1027)	-	1107565..1108233 (-)	669	WP_011922395.1	SatD family protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=31109 SSUBM407_RS05435 WP_012775101.1 1103277..1104347(-) (xerS) [Streptococcus suis BM407]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=31109 SSUBM407_RS05435 WP_012775101.1 1103277..1104347(-) (xerS) [Streptococcus suis BM407]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831