Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   CEQ05_RS17940 Genome accession   NZ_CP031756
Coordinates   3582153..3582776 (+) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain FDAARGOS_327     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3577153..3587776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEQ05_RS17920 (CEQ05_17920) - 3577302..3579059 (-) 1758 WP_032705615.1 Lon protease family protein -
  CEQ05_RS17925 (CEQ05_17925) matP 3579245..3579697 (+) 453 WP_015367432.1 macrodomain Ter protein MatP -
  CEQ05_RS17930 (CEQ05_17930) ompA 3579789..3580841 (-) 1053 WP_080473199.1 porin OmpA -
  CEQ05_RS17935 (CEQ05_17935) sulA 3581194..3581703 (-) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  CEQ05_RS17940 (CEQ05_17940) sxy/tfoX 3582153..3582776 (+) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  CEQ05_RS17945 (CEQ05_17945) yccS 3582764..3584899 (-) 2136 WP_015367427.1 YccS family putative transporter -
  CEQ05_RS17950 (CEQ05_17950) - 3584917..3585363 (-) 447 WP_015367426.1 YccF domain-containing protein -
  CEQ05_RS17955 (CEQ05_17955) helD 3585487..3587541 (+) 2055 WP_015367425.1 DNA helicase IV -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=311008 CEQ05_RS17940 WP_026612357.1 3582153..3582776(+) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS_327]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=311008 CEQ05_RS17940 WP_026612357.1 3582153..3582776(+) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS_327]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment