Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   D0Y85_RS15695 Genome accession   NZ_CP031741
Coordinates   3406885..3407286 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. G4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3401885..3412286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0Y85_RS15680 - 3403896..3405932 (-) 2037 WP_025877752.1 methyl-accepting chemotaxis protein -
  D0Y85_RS15685 - 3405974..3406504 (-) 531 WP_093818702.1 chemotaxis protein CheW -
  D0Y85_RS15690 - 3406504..3406866 (-) 363 WP_117311113.1 response regulator -
  D0Y85_RS15695 pilG 3406885..3407286 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  D0Y85_RS15700 gshB 3407527..3408474 (+) 948 WP_117311115.1 glutathione synthase -
  D0Y85_RS15705 - 3408474..3409358 (+) 885 WP_117311117.1 energy transducer TonB -
  D0Y85_RS15710 tsaB 3409887..3410600 (-) 714 WP_117311119.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=310967 D0Y85_RS15695 WP_005418455.1 3406885..3407286(-) (pilG) [Stenotrophomonas sp. G4]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=310967 D0Y85_RS15695 WP_005418455.1 3406885..3407286(-) (pilG) [Stenotrophomonas sp. G4]
ATGACTGAAAACACGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGACTCGAAGACCATCCGCAG
GACTGCGGAAACACTGCTGAAGCGCGAAGGCTGCGAAGTAGTGACCGCGACGGACGGTTTCGAGGCCCTGGCCAAGATTG
CCGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCACTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCATCCAAGGATGGTCTGTTCGACAAGGCGCGGGGGCGCAT
CGTCGGCTCGGAGCAATACCTGACCAAGCCATTCACGCGCGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment