Detailed information
Bioinformatically predicted
Overview
| Name | irvR | Type | Regulator |
| Locus tag | DDV21_RS04910 | Genome accession | NZ_CP031733 |
| Coordinates | 998844..999248 (-) | Length | 134 a.a. |
| NCBI ID | WP_116877365.1 | Uniprot ID | A0A372KRJ8 |
| Organism | Streptococcus chenjunshii strain Z15 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 993844..1004248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDV21_RS04890 (DDV21_004890) | cas1 | 995351..996220 (+) | 870 | WP_116877369.1 | type II CRISPR-associated endonuclease Cas1 | - |
| DDV21_RS04895 (DDV21_004895) | cas2 | 996217..996561 (+) | 345 | WP_116877368.1 | CRISPR-associated endonuclease Cas2 | - |
| DDV21_RS04900 (DDV21_004900) | csn2 | 996548..997213 (+) | 666 | WP_116877367.1 | type II-A CRISPR-associated protein Csn2 | - |
| DDV21_RS11755 | - | 997745..997915 (+) | 171 | WP_162886285.1 | hypothetical protein | - |
| DDV21_RS04905 (DDV21_004905) | ndk | 998234..998647 (+) | 414 | WP_116877366.1 | nucleoside-diphosphate kinase | - |
| DDV21_RS04910 (DDV21_004910) | irvR | 998844..999248 (-) | 405 | WP_116877365.1 | helix-turn-helix transcriptional regulator | Regulator |
| DDV21_RS04915 (DDV21_004915) | - | 999514..999819 (+) | 306 | WP_241964714.1 | helix-turn-helix transcriptional regulator | - |
| DDV21_RS04920 (DDV21_004920) | - | 999949..1000257 (+) | 309 | WP_116877364.1 | hypothetical protein | - |
| DDV21_RS04925 (DDV21_004925) | lepA | 1000478..1002304 (+) | 1827 | WP_116877363.1 | translation elongation factor 4 | - |
| DDV21_RS04930 (DDV21_004930) | - | 1002592..1003776 (+) | 1185 | WP_116877362.1 | NADH-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 14888.73 Da Isoelectric Point: 6.4791
>NTDB_id=310833 DDV21_RS04910 WP_116877365.1 998844..999248(-) (irvR) [Streptococcus chenjunshii strain Z15]
MGRGTLTPQDLVAMKIVSANLQRLLKESGIKQADLATTLDIPKSSLNEYVKGRSLPKAGNVQKLADYFGLKKSEVDPRFS
HYNYTASAMLEDINKAASQLDEERQELVLDFAHQQIKKQQDTASDSKDSDTDSK
MGRGTLTPQDLVAMKIVSANLQRLLKESGIKQADLATTLDIPKSSLNEYVKGRSLPKAGNVQKLADYFGLKKSEVDPRFS
HYNYTASAMLEDINKAASQLDEERQELVLDFAHQQIKKQQDTASDSKDSDTDSK
Nucleotide
Download Length: 405 bp
>NTDB_id=310833 DDV21_RS04910 WP_116877365.1 998844..999248(-) (irvR) [Streptococcus chenjunshii strain Z15]
ATGGGACGCGGTACATTAACACCACAAGATTTAGTAGCTATGAAAATCGTATCCGCTAATCTGCAAAGACTTTTAAAAGA
AAGCGGCATAAAACAAGCGGACTTAGCTACAACACTCGATATTCCCAAGAGCAGTTTAAACGAATATGTTAAAGGCAGAA
GTTTGCCTAAAGCTGGCAATGTTCAAAAACTTGCAGATTATTTTGGTTTGAAAAAATCAGAAGTTGATCCAAGATTTTCG
CATTACAACTATACTGCTTCTGCTATGCTTGAGGATATCAACAAAGCTGCCAGCCAGCTGGATGAAGAAAGGCAAGAGCT
TGTCCTTGATTTTGCCCACCAGCAAATTAAAAAACAGCAGGACACAGCTTCAGACAGCAAAGACTCTGACACAGACAGCA
AGTAA
ATGGGACGCGGTACATTAACACCACAAGATTTAGTAGCTATGAAAATCGTATCCGCTAATCTGCAAAGACTTTTAAAAGA
AAGCGGCATAAAACAAGCGGACTTAGCTACAACACTCGATATTCCCAAGAGCAGTTTAAACGAATATGTTAAAGGCAGAA
GTTTGCCTAAAGCTGGCAATGTTCAAAAACTTGCAGATTATTTTGGTTTGAAAAAATCAGAAGTTGATCCAAGATTTTCG
CATTACAACTATACTGCTTCTGCTATGCTTGAGGATATCAACAAAGCTGCCAGCCAGCTGGATGAAGAAAGGCAAGAGCT
TGTCCTTGATTTTGCCCACCAGCAAATTAAAAAACAGCAGGACACAGCTTCAGACAGCAAAGACTCTGACACAGACAGCA
AGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| irvR | Streptococcus mutans UA159 |
63.359 |
97.761 |
0.619 |