Detailed information    

insolico Bioinformatically predicted

Overview


Name   treR   Type   Regulator
Locus tag   DDV21_RS01370 Genome accession   NZ_CP031733
Coordinates   251508..252218 (-) Length   236 a.a.
NCBI ID   WP_116877572.1    Uniprot ID   A0A372KNB8
Organism   Streptococcus chenjunshii strain Z15     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 246508..257218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV21_RS01350 (DDV21_001350) - 246591..247301 (+) 711 WP_116877576.1 thioesterase domain-containing protein -
  DDV21_RS01355 (DDV21_001355) metK 247408..248601 (+) 1194 WP_116877575.1 methionine adenosyltransferase -
  DDV21_RS01360 (DDV21_001360) - 248986..249312 (+) 327 WP_116877574.1 YrdB family protein -
  DDV21_RS01365 (DDV21_001365) - 249383..250642 (+) 1260 WP_116877573.1 YqiA/YcfP family alpha/beta fold hydrolase -
  DDV21_RS01370 (DDV21_001370) treR 251508..252218 (-) 711 WP_116877572.1 trehalose operon repressor Regulator
  DDV21_RS01375 (DDV21_001375) treP 252557..254524 (+) 1968 WP_116877571.1 PTS system trehalose-specific EIIBC component -
  DDV21_RS01380 (DDV21_001380) treC 254759..256390 (+) 1632 WP_116877608.1 alpha,alpha-phosphotrehalase -

Sequence


Protein


Download         Length: 236 a.a.        Molecular weight: 27097.18 Da        Isoelectric Point: 9.2773

>NTDB_id=310818 DDV21_RS01370 WP_116877572.1 251508..252218(-) (treR) [Streptococcus chenjunshii strain Z15]
MKKYEHIYKLLEADILKGVYAIGDYLPSETELAAQHAVSRDTVRKALTLLAENGLIKKRQGSGSQIIKHEPINFPVSALT
SYQELVESLAINSQTNLIAIDKLIVDEKLSLLTGFKVNSLVWRLIRQRIVDDVASILDIDYLSKTLVPQISRAAAEYSIY
HYLENQLHLDIAYTKKEITIDQINERDKLLLDIGSEHHVVSVKSKGYLRDGRQFQFTDSRHKLDKFRFVDFAQRKR

Nucleotide


Download         Length: 711 bp        

>NTDB_id=310818 DDV21_RS01370 WP_116877572.1 251508..252218(-) (treR) [Streptococcus chenjunshii strain Z15]
ATGAAAAAATATGAACACATTTATAAATTGCTGGAAGCCGATATCTTAAAAGGTGTTTATGCCATCGGCGACTATCTCCC
CAGCGAAACTGAACTGGCCGCTCAGCATGCTGTCAGCCGCGATACTGTCCGCAAAGCTCTGACACTTTTGGCTGAAAACG
GCTTAATTAAAAAAAGGCAGGGTTCAGGCTCACAAATTATTAAGCATGAACCCATTAACTTTCCGGTCTCAGCACTGACC
AGCTATCAGGAATTGGTAGAGAGTTTAGCTATCAATTCCCAGACCAACCTGATTGCCATCGACAAATTAATCGTTGATGA
AAAACTTTCACTTCTGACCGGTTTTAAAGTGAACAGCCTCGTTTGGCGCCTTATTCGCCAGCGTATCGTTGACGATGTCG
CATCCATCCTGGATATCGATTACCTCAGCAAGACTCTCGTTCCCCAAATCAGCAGAGCGGCTGCCGAATACTCTATCTAT
CACTATCTGGAAAATCAGCTGCATTTAGATATTGCCTATACTAAAAAAGAAATTACCATTGACCAGATTAACGAACGCGA
TAAACTTTTGCTGGATATCGGCTCAGAGCACCATGTTGTCTCTGTTAAGTCCAAAGGATACCTGAGAGACGGCAGGCAGT
TTCAATTCACAGACAGCCGCCATAAACTGGACAAGTTCCGTTTTGTTGACTTTGCCCAGCGCAAACGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A372KNB8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.22

100

0.682


Multiple sequence alignment