Detailed information    

insolico Bioinformatically predicted

Overview


Name   tonB2   Type   Machinery gene
Locus tag   BEN71_RS16285 Genome accession   NZ_CP031716
Coordinates   3283350..3284231 (-) Length   293 a.a.
NCBI ID   WP_068973622.1    Uniprot ID   -
Organism   Acinetobacter wuhouensis strain WCHA60     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3278350..3289231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN71_RS16255 (BEN71_16255) - 3278395..3279234 (-) 840 WP_068973642.1 bifunctional transcriptional activator/DNA repair enzyme AdaA -
  BEN71_RS16260 (BEN71_16260) - 3279399..3279773 (-) 375 WP_068973627.1 cytochrome b562 -
  BEN71_RS16265 (BEN71_16265) coaBC 3279905..3281170 (-) 1266 WP_068973626.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  BEN71_RS16270 (BEN71_16270) radC 3281285..3282031 (+) 747 WP_068973625.1 DNA repair protein RadC -
  BEN71_RS16275 (BEN71_16275) - 3282071..3282982 (+) 912 WP_068973624.1 bestrophin family protein -
  BEN71_RS16280 (BEN71_16280) - 3283019..3283306 (+) 288 WP_068973623.1 antibiotic biosynthesis monooxygenase -
  BEN71_RS16285 (BEN71_16285) tonB2 3283350..3284231 (-) 882 WP_068973622.1 energy transducer TonB Machinery gene
  BEN71_RS16290 (BEN71_16290) - 3284461..3285150 (+) 690 WP_068973621.1 hypothetical protein -
  BEN71_RS16295 (BEN71_16295) - 3285600..3286307 (+) 708 WP_086322757.1 DUF3108 domain-containing protein -
  BEN71_RS16300 (BEN71_16300) - 3286411..3286986 (+) 576 WP_068973620.1 xanthine phosphoribosyltransferase -
  BEN71_RS16305 (BEN71_16305) - 3287135..3287995 (+) 861 WP_068973619.1 acyl-CoA thioesterase II -
  BEN71_RS16310 (BEN71_16310) - 3288237..3288599 (+) 363 WP_068973618.1 hypothetical protein -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33572.09 Da        Isoelectric Point: 6.8947

>NTDB_id=310693 BEN71_RS16285 WP_068973622.1 3283350..3284231(-) (tonB2) [Acinetobacter wuhouensis strain WCHA60]
MIKKLYADTKHSDYWWQDPLFIGAVSVAVITHLLFLSIQFGMPQQNDAATKEIAISIRPSEDKVKDADFLAQEDQQGSGT
FRKEHRMSSDMPAQAEDQSAGDQQLQALEQMQQKRELNFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKAAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLV
ESSGHSILDEAAKNSVRKGAPFGRFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=310693 BEN71_RS16285 WP_068973622.1 3283350..3284231(-) (tonB2) [Acinetobacter wuhouensis strain WCHA60]
ATGATAAAAAAATTATATGCAGATACCAAGCATTCAGACTATTGGTGGCAAGATCCATTATTTATCGGTGCCGTCTCAGT
TGCAGTCATTACGCATCTGCTTTTTTTATCGATCCAATTTGGCATGCCTCAACAAAATGATGCTGCGACCAAAGAAATCG
CGATCTCAATTCGACCAAGTGAAGACAAAGTCAAAGATGCGGACTTTCTCGCTCAAGAAGATCAGCAGGGTTCAGGTACA
TTCCGTAAAGAGCATCGTATGTCGAGCGATATGCCTGCTCAAGCAGAAGATCAAAGTGCTGGGGATCAGCAGTTGCAAGC
TTTGGAACAAATGCAACAAAAGCGTGAATTAAACTTTGAAGAAAAAGTATTGATGACGGTTTTAAGTTGGCAGAAACAAG
CCGAACAAAATGATCGTAAAAAAGCCATGGAAGAGTTGCAAAGCCAAATGCAAGCTAAGGCTGCAATGGTGGCAAGCTTA
GAGGCGCAATATTTACAGAAACAACAAAATTTTAGTAAGCAACAGAAAATTAAAACCCTCGATGGTATACAAGCCAAACA
AGATGCTTCAGCTGGTTATTTAGATAAGTTTCGTGAAAAAGTCGAAATGTATGGCAACCGTTATTATCCTGATCTTGCGA
AGCAACAACGCCTTTCTGGTGAGGTTCGTTTGATGGTGATTTTAAATAATGAAGGTGGAATACGAGCAATCCGTCTGGTA
GAAAGCTCAGGGCATTCAATCTTGGATGAAGCAGCCAAGAACTCAGTCCGTAAGGGTGCGCCGTTTGGGCGCTTTGATGC
GAAAATGAAGGATATTTCAGAACTTCGTATTATTCGAACTTGGCGCTTTGATCCTGCGGAAGCTGAGTTTGAAGTGCGTT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

72.696

100

0.727


Multiple sequence alignment