Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   D0T92_RS07225 Genome accession   NZ_CP031700
Coordinates   1565173..1565622 (+) Length   149 a.a.
NCBI ID   WP_151051553.1    Uniprot ID   A0A5J6PZV1
Organism   Neisseria zalophi strain ATCC BAA-2455     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1560173..1570622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0T92_RS07200 (D0T92_07255) fabG 1560970..1561716 (+) 747 WP_151051549.1 3-oxoacyl-ACP reductase FabG -
  D0T92_RS07205 (D0T92_07260) - 1561975..1563957 (+) 1983 WP_151053017.1 monovalent cation:proton antiporter family protein -
  D0T92_RS07220 (D0T92_07275) - 1564393..1565100 (+) 708 WP_151051551.1 phosphoglycolate phosphatase -
  D0T92_RS07225 (D0T92_07280) recX 1565173..1565622 (+) 450 WP_151051553.1 recombination regulator RecX Regulator
  D0T92_RS07230 (D0T92_07285) nfsB 1565812..1566471 (+) 660 WP_151051555.1 oxygen-insensitive NAD(P)H nitroreductase -
  D0T92_RS11765 (D0T92_07295) - 1566549..1566795 (-) 247 Protein_1414 transposase -
  D0T92_RS07250 (D0T92_07305) htpX 1566955..1567797 (-) 843 WP_151051559.1 protease HtpX -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17579.92 Da        Isoelectric Point: 8.4683

>NTDB_id=310557 D0T92_RS07225 WP_151051553.1 1565173..1565622(+) (recX) [Neisseria zalophi strain ATCC BAA-2455]
MKQPLSLRARALNILARQEISRADLKRKLAPYADNENELDQLLDELAERNWQSDERFAEAYIHSKSKRHGTLRLKQTLQQ
KGIDNETAASFLPSREQELQTAIEVLHKKFKQPAQDMKEMQKQMRFLAYRGFDTDTIRAAMKNDWFEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=310557 D0T92_RS07225 WP_151051553.1 1565173..1565622(+) (recX) [Neisseria zalophi strain ATCC BAA-2455]
ATGAAGCAACCCCTATCCCTCCGTGCCCGTGCCTTAAATATACTCGCCCGCCAAGAAATCAGCCGCGCCGACCTTAAACG
CAAACTGGCACCTTATGCCGACAATGAAAACGAACTAGATCAACTTTTAGACGAACTGGCCGAACGAAACTGGCAATCAG
ACGAACGCTTTGCCGAAGCCTATATACACAGCAAAAGCAAACGACACGGCACGCTACGCCTGAAACAAACTTTACAGCAA
AAAGGCATCGATAATGAAACAGCCGCATCCTTTTTACCCAGCCGTGAGCAAGAATTGCAAACAGCCATTGAAGTGCTGCA
TAAAAAATTCAAACAACCCGCCCAAGATATGAAAGAGATGCAAAAACAAATGCGTTTTCTCGCTTATCGGGGTTTTGATA
CCGACACTATCCGTGCTGCTATGAAAAACGACTGGTTTGAAGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5J6PZV1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

63.265

98.658

0.624

Multiple sequence alignment