Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | D0T92_RS02555 | Genome accession | NZ_CP031700 |
| Coordinates | 563173..563706 (+) | Length | 177 a.a. |
| NCBI ID | WP_151049937.1 | Uniprot ID | A0A5J6PXA5 |
| Organism | Neisseria zalophi strain ATCC BAA-2455 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 542074..563153 | 563173..563706 | flank | 20 |
Gene organization within MGE regions
Location: 542074..563706
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T92_RS02470 (D0T92_02505) | - | 542083..542901 (+) | 819 | WP_191963657.1 | factor H binding protein domain-containing protein | - |
| D0T92_RS02475 (D0T92_02510) | - | 543016..543993 (-) | 978 | WP_151049906.1 | L,D-transpeptidase | - |
| D0T92_RS02480 (D0T92_02515) | - | 544923..546395 (+) | 1473 | WP_225315129.1 | 23S rRNA methyltransferase | - |
| D0T92_RS02485 (D0T92_02520) | - | 546428..547522 (+) | 1095 | WP_151049910.1 | response regulator | - |
| D0T92_RS02490 (D0T92_02525) | - | 547546..548082 (+) | 537 | WP_151049912.1 | ATP/GTP-binding protein | - |
| D0T92_RS02495 (D0T92_02530) | - | 548084..548725 (+) | 642 | WP_151049914.1 | peptidase M23 | - |
| D0T92_RS02500 (D0T92_02535) | - | 548804..549166 (+) | 363 | WP_151049916.1 | roadblock/LC7 domain-containing protein | - |
| D0T92_RS02505 (D0T92_02540) | - | 549304..551475 (-) | 2172 | WP_151049919.1 | right-handed parallel beta-helix repeat-containing protein | - |
| D0T92_RS02510 (D0T92_02545) | - | 551799..552839 (-) | 1041 | WP_151049921.1 | ABC transporter ATP-binding protein | - |
| D0T92_RS02515 (D0T92_02550) | - | 552836..554452 (-) | 1617 | WP_151049922.1 | iron ABC transporter permease | - |
| D0T92_RS02520 (D0T92_02555) | - | 554695..555687 (+) | 993 | WP_151049924.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| D0T92_RS02525 (D0T92_02560) | - | 556051..556935 (+) | 885 | WP_151049926.1 | lysophospholipid acyltransferase family protein | - |
| D0T92_RS02530 (D0T92_02565) | rfaQ | 556950..558029 (+) | 1080 | WP_151049928.1 | putative lipopolysaccharide heptosyltransferase III | - |
| D0T92_RS02535 (D0T92_02570) | - | 558226..560646 (-) | 2421 | WP_151049930.1 | penicillin-binding protein 1A | - |
| D0T92_RS02540 (D0T92_02575) | pilM | 560797..561894 (+) | 1098 | WP_404821665.1 | type IV pilus assembly protein PilM | - |
| D0T92_RS02545 (D0T92_02580) | - | 561897..562514 (+) | 618 | WP_151049933.1 | PilN domain-containing protein | - |
| D0T92_RS02550 (D0T92_02585) | - | 562518..563153 (+) | 636 | WP_151049935.1 | type 4a pilus biogenesis protein PilO | - |
| D0T92_RS02555 (D0T92_02590) | pilP | 563173..563706 (+) | 534 | WP_151049937.1 | pilus assembly protein PilP | Machinery gene |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 19493.88 Da Isoelectric Point: 5.7814
>NTDB_id=310540 D0T92_RS02555 WP_151049937.1 563173..563706(+) (pilP) [Neisseria zalophi strain ATCC BAA-2455]
MTNKMLLAGILVLSACTPAHEDLSEWMDTTRKQAKAKVIPFEAPAVGQPKSYNPPQFSGLNAFESKRLNSVQQGTNAPDT
SRPKEILEGFSLENLKYVGSLTKGNQTKGYVEADGHVYTVSPGNYIGQNYGKIQSITADQIMITELIEDSYGNWAYRKAE
LPLMSTETNNDTAQNNK
MTNKMLLAGILVLSACTPAHEDLSEWMDTTRKQAKAKVIPFEAPAVGQPKSYNPPQFSGLNAFESKRLNSVQQGTNAPDT
SRPKEILEGFSLENLKYVGSLTKGNQTKGYVEADGHVYTVSPGNYIGQNYGKIQSITADQIMITELIEDSYGNWAYRKAE
LPLMSTETNNDTAQNNK
Nucleotide
Download Length: 534 bp
>NTDB_id=310540 D0T92_RS02555 WP_151049937.1 563173..563706(+) (pilP) [Neisseria zalophi strain ATCC BAA-2455]
ATGACAAATAAAATGTTACTTGCAGGCATCTTGGTTTTATCAGCTTGCACACCGGCTCACGAAGATCTTAGTGAATGGAT
GGACACTACTCGTAAACAGGCAAAAGCGAAAGTCATTCCATTTGAAGCACCTGCTGTGGGTCAGCCGAAATCTTATAACC
CTCCTCAATTTAGTGGGTTAAATGCTTTTGAAAGTAAGCGGTTGAATAGCGTACAGCAAGGTACTAATGCACCTGATACA
AGTAGGCCCAAAGAAATATTGGAAGGTTTTAGTTTAGAAAATTTAAAATATGTCGGCAGTTTGACCAAAGGGAACCAGAC
AAAAGGCTATGTAGAAGCTGACGGCCATGTTTATACCGTAAGCCCGGGAAATTATATCGGACAGAACTACGGTAAAATTC
AATCTATTACTGCAGATCAAATTATGATAACGGAACTTATTGAAGACAGCTATGGAAATTGGGCTTATCGCAAAGCAGAG
TTACCTTTGATGAGTACGGAAACTAATAATGATACTGCTCAGAACAACAAATAA
ATGACAAATAAAATGTTACTTGCAGGCATCTTGGTTTTATCAGCTTGCACACCGGCTCACGAAGATCTTAGTGAATGGAT
GGACACTACTCGTAAACAGGCAAAAGCGAAAGTCATTCCATTTGAAGCACCTGCTGTGGGTCAGCCGAAATCTTATAACC
CTCCTCAATTTAGTGGGTTAAATGCTTTTGAAAGTAAGCGGTTGAATAGCGTACAGCAAGGTACTAATGCACCTGATACA
AGTAGGCCCAAAGAAATATTGGAAGGTTTTAGTTTAGAAAATTTAAAATATGTCGGCAGTTTGACCAAAGGGAACCAGAC
AAAAGGCTATGTAGAAGCTGACGGCCATGTTTATACCGTAAGCCCGGGAAATTATATCGGACAGAACTACGGTAAAATTC
AATCTATTACTGCAGATCAAATTATGATAACGGAACTTATTGAAGACAGCTATGGAAATTGGGCTTATCGCAAAGCAGAG
TTACCTTTGATGAGTACGGAAACTAATAATGATACTGCTCAGAACAACAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
54.386 |
96.61 |
0.525 |