Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DXY21_RS17725 Genome accession   NZ_CP031694
Coordinates   3602987..3603451 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SRCM101368     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3597987..3608451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY21_RS20710 - 3598502..3599045 (-) 544 Protein_3455 hypothetical protein -
  DXY21_RS17705 (DXY21_03549) fadH 3599156..3599920 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  DXY21_RS17710 (DXY21_03550) - 3600064..3600927 (+) 864 WP_015388306.1 metallophosphoesterase -
  DXY21_RS17715 (DXY21_03551) - 3601002..3601496 (+) 495 WP_088037173.1 L,D-transpeptidase family protein -
  DXY21_RS17720 (DXY21_03552) - 3601572..3602864 (+) 1293 WP_043867050.1 MFS transporter -
  DXY21_RS17725 (DXY21_03553) kre 3602987..3603451 (+) 465 WP_003154622.1 YkyB family protein Regulator
  DXY21_RS17730 (DXY21_03554) cheV 3603494..3604405 (-) 912 WP_014304917.1 chemotaxis protein CheV -
  DXY21_RS20460 (DXY21_03555) - 3604594..3604755 (+) 162 WP_007409608.1 hypothetical protein -
  DXY21_RS17735 (DXY21_03556) - 3604956..3606175 (+) 1220 Protein_3463 aminotransferase A -
  DXY21_RS17740 (DXY21_03557) - 3606151..3607971 (-) 1821 WP_003154628.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=310426 DXY21_RS17725 WP_003154622.1 3602987..3603451(+) (kre) [Bacillus velezensis strain SRCM101368]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=310426 DXY21_RS17725 WP_003154622.1 3602987..3603451(+) (kre) [Bacillus velezensis strain SRCM101368]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment