Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | DXY22_RS15500 | Genome accession | NZ_CP031693 |
| Coordinates | 3046858..3047895 (-) | Length | 345 a.a. |
| NCBI ID | WP_044052501.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM101393 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3041858..3052895
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXY22_RS15450 (DXY22_03037) | tasA | 3041956..3042741 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| DXY22_RS15455 (DXY22_03038) | sipW | 3042805..3043377 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| DXY22_RS15460 (DXY22_03039) | tapA | 3043361..3044122 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| DXY22_RS15465 (DXY22_03040) | yqzG | 3044394..3044720 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| DXY22_RS15470 (DXY22_03041) | spoIITA | 3044762..3044941 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| DXY22_RS15475 (DXY22_03042) | comGG | 3045012..3045386 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| DXY22_RS15480 | comGF | 3045387..3045770 (-) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| DXY22_RS15485 (DXY22_03044) | comGE | 3045796..3046143 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| DXY22_RS15490 (DXY22_03045) | comGD | 3046127..3046558 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| DXY22_RS15495 (DXY22_03046) | comGC | 3046548..3046844 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| DXY22_RS15500 (DXY22_03047) | comGB | 3046858..3047895 (-) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| DXY22_RS15505 (DXY22_03048) | comGA | 3047882..3048952 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| DXY22_RS15510 (DXY22_03050) | - | 3049165..3049362 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| DXY22_RS15515 (DXY22_03051) | corA | 3049364..3050317 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| DXY22_RS15520 (DXY22_03052) | yqhB | 3050460..3051788 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| DXY22_RS15525 (DXY22_03053) | rsbRD | 3051841..3052677 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39746.21 Da Isoelectric Point: 9.6257
>NTDB_id=310343 DXY22_RS15500 WP_044052501.1 3046858..3047895(-) (comGB) [Bacillus subtilis strain SRCM101393]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=310343 DXY22_RS15500 WP_044052501.1 3046858..3047895(-) (comGB) [Bacillus subtilis strain SRCM101393]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTTGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTTGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |