Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   DXY22_RS10945 Genome accession   NZ_CP031693
Coordinates   2113989..2114564 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM101393     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2108989..2119564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS10915 (DXY22_02144) dapD 2109175..2109885 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  DXY22_RS10920 (DXY22_02145) dapI 2109955..2111079 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  DXY22_RS10925 (DXY22_02146) ykuS 2111141..2111386 (+) 246 WP_003232382.1 YkuS family protein -
  DXY22_RS10930 (DXY22_02147) mscT 2111423..2112226 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  DXY22_RS10935 (DXY22_02148) ahpA 2112463..2113005 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  DXY22_RS10940 (DXY22_02149) ykuV 2113077..2113523 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  DXY22_RS10945 (DXY22_02150) rok 2113989..2114564 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  DXY22_RS10950 (DXY22_02151) cse15 2114605..2115570 (-) 966 WP_044052541.1 spore protein Cse15 -
  DXY22_RS10955 (DXY22_02152) mobA 2115707..2116306 (+) 600 WP_015252185.1 molybdenum cofactor guanylyltransferase -
  DXY22_RS10960 (DXY22_02153) moeB 2116357..2117376 (+) 1020 WP_044052540.1 molybdopterin-synthase adenylyltransferase MoeB -
  DXY22_RS10965 (DXY22_02154) glp 2117394..2118686 (+) 1293 WP_015252183.1 gephyrin-like molybdotransferase Glp -
  DXY22_RS10970 (DXY22_02155) mobB 2118647..2119168 (+) 522 WP_015252182.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=310327 DXY22_RS10945 WP_003232378.1 2113989..2114564(+) (rok) [Bacillus subtilis strain SRCM101393]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=310327 DXY22_RS10945 WP_003232378.1 2113989..2114564(+) (rok) [Bacillus subtilis strain SRCM101393]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment