Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DXY22_RS10830 Genome accession   NZ_CP031693
Coordinates   2094790..2095254 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM101393     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2089790..2100254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS10810 (DXY22_02124) kinA 2090257..2092077 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  DXY22_RS10815 (DXY22_02125) dapX 2092087..2093268 (-) 1182 WP_015252196.1 aminotransferase A -
  DXY22_RS10820 (DXY22_02126) - 2093470..2093631 (-) 162 WP_003245246.1 hypothetical protein -
  DXY22_RS10825 (DXY22_02127) cheV 2093835..2094746 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  DXY22_RS10830 (DXY22_02128) kre 2094790..2095254 (-) 465 WP_003232406.1 YkyB family protein Regulator
  DXY22_RS10835 (DXY22_02129) ykuC 2095380..2096672 (-) 1293 WP_014479656.1 MFS transporter -
  DXY22_RS10840 (DXY22_02130) ltdD 2096748..2097242 (-) 495 WP_080019551.1 L,D-transpeptidase family protein -
  DXY22_RS10845 (DXY22_02131) ppeE 2097299..2098159 (-) 861 WP_160245680.1 metallophosphoesterase -
  DXY22_RS10850 (DXY22_02132) fadH 2098302..2099066 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=310326 DXY22_RS10830 WP_003232406.1 2094790..2095254(-) (kre) [Bacillus subtilis strain SRCM101393]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=310326 DXY22_RS10830 WP_003232406.1 2094790..2095254(-) (kre) [Bacillus subtilis strain SRCM101393]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment