Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   DXY22_RS09465 Genome accession   NZ_CP031693
Coordinates   1844012..1845133 (+) Length   373 a.a.
NCBI ID   WP_015252353.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM101393     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1839012..1850133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS09430 (DXY22_01849) yjbB 1839654..1840871 (+) 1218 WP_080019554.1 MFS transporter -
  DXY22_RS09435 (DXY22_01850) yjbC 1841035..1841613 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  DXY22_RS09440 (DXY22_01851) spx 1841794..1842189 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  DXY22_RS09445 (DXY22_01852) yjbE 1842232..1842888 (-) 657 WP_015252355.1 YjbE family putative metal transport protein -
  DXY22_RS09450 - 1843058..1843198 (+) 141 WP_119122854.1 hypothetical protein -
  DXY22_RS09455 (DXY22_01853) mecA 1843165..1843821 (+) 657 WP_015252354.1 adaptor protein MecA Regulator
  DXY22_RS09460 - 1843816..1843938 (-) 123 WP_003245684.1 hypothetical protein -
  DXY22_RS09465 (DXY22_01854) coiA 1844012..1845133 (+) 1122 WP_015252353.1 competence protein CoiA Machinery gene
  DXY22_RS09470 (DXY22_01855) pepF 1845363..1847192 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  DXY22_RS09475 (DXY22_01856) - 1847230..1847397 (-) 168 WP_003244944.1 hypothetical protein -
  DXY22_RS09480 (DXY22_01858) spxH 1847711..1848610 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  DXY22_RS09485 (DXY22_01859) bhbI 1848607..1849005 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  DXY22_RS09490 (DXY22_01860) cwlQ 1849260..1849994 (-) 735 WP_033883583.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43851.89 Da        Isoelectric Point: 10.0622

>NTDB_id=310322 DXY22_RS09465 WP_015252353.1 1844012..1845133(+) (coiA) [Bacillus subtilis strain SRCM101393]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=310322 DXY22_RS09465 WP_015252353.1 1844012..1845133(+) (coiA) [Bacillus subtilis strain SRCM101393]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGAGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGTAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

100

0.989


Multiple sequence alignment