Detailed information NTG0310317

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: DXY22_RS09340
• Genome accession: NZ_CP031693
• Coordinates: 1820727..1821680 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM101393
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1815727..1826680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXY22_RS09315 (DXY22_01826)	argF	1817560..1818519 (+)	960	WP_153952064.1	ornithine carbamoyltransferase	-
DXY22_RS09320 (DXY22_01827)	yjzC	1818605..1818784 (+)	180	WP_003245356.1	YjzC family protein	-
DXY22_RS09325 (DXY22_01828)	yjzD	1818830..1819015 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
DXY22_RS09330 (DXY22_01829)	-	1819264..1819998 (+)	735	WP_003245223.1	hypothetical protein	-
DXY22_RS09335 (DXY22_01830)	-	1820080..1820637 (+)	558	WP_015252365.1	hypothetical protein	-
DXY22_RS09340 (DXY22_01831)	med	1820727..1821680 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
DXY22_RS09345 (DXY22_01832)	comZ	1821695..1821886 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
DXY22_RS09350 (DXY22_01833)	yjzB	1821916..1822155 (-)	240	WP_003232972.1	spore coat protein YjzB	-
DXY22_RS09355 (DXY22_01834)	fabH	1822320..1823258 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
DXY22_RS09360 (DXY22_01835)	fabF	1823281..1824522 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
DXY22_RS09365 (DXY22_01836)	yjaZ	1824598..1825383 (+)	786	WP_134982187.1	DUF2268 domain-containing protein	-
DXY22_RS09370 (DXY22_01837)	appD	1825575..1826561 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=310317 DXY22_RS09340 WP_014476425.1 1820727..1821680(+) (med) [Bacillus subtilis strain SRCM101393]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=310317 DXY22_RS09340 WP_014476425.1 1820727..1821680(+) (med) [Bacillus subtilis strain SRCM101393]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997