Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DXY22_RS03560 | Genome accession | NZ_CP031693 |
| Coordinates | 695528..695818 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SRCM101393 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 690528..700818
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXY22_RS03520 (DXY22_00688) | darA | 690551..690880 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| DXY22_RS03525 (DXY22_00689) | yaaR | 690893..691333 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| DXY22_RS03530 (DXY22_00690) | holB | 691345..692334 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| DXY22_RS03535 (DXY22_00691) | ricT | 692337..693164 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| DXY22_RS03540 (DXY22_00692) | yabA | 693179..693538 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| DXY22_RS03545 (DXY22_00693) | trmNF | 693597..694340 (+) | 744 | WP_015253014.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| DXY22_RS03550 (DXY22_00694) | yazA | 694327..694626 (+) | 300 | WP_015253013.1 | GIY-YIG nuclease family protein | - |
| DXY22_RS03555 (DXY22_00695) | rsmI | 694601..695479 (+) | 879 | WP_015253012.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DXY22_RS03560 (DXY22_00696) | abrB | 695528..695818 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| DXY22_RS03565 (DXY22_00697) | metG | 696313..698307 (+) | 1995 | WP_015253011.1 | methionine--tRNA ligase | - |
| DXY22_RS03570 (DXY22_00698) | dayD | 698386..699153 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| DXY22_RS03575 (DXY22_00699) | yabE | 699309..700622 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=310299 DXY22_RS03560 WP_003226760.1 695528..695818(-) (abrB) [Bacillus subtilis strain SRCM101393]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=310299 DXY22_RS03560 WP_003226760.1 695528..695818(-) (abrB) [Bacillus subtilis strain SRCM101393]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |