Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | CH556_RS00285 | Genome accession | NZ_CP031692 |
| Coordinates | 57229..57741 (-) | Length | 170 a.a. |
| NCBI ID | WP_005648034.1 | Uniprot ID | A0A2X1QPL8 |
| Organism | Haemophilus influenzae strain P595-8370 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52229..62741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH556_RS00270 (CH556_00270) | comQ | 55535..55822 (-) | 288 | WP_005648029.1 | DUF5374 domain-containing protein | Machinery gene |
| CH556_RS00275 (CH556_00275) | comP | 55815..56498 (-) | 684 | WP_005648030.1 | DUF2572 family protein | Machinery gene |
| CH556_RS00280 (CH556_00280) | comO | 56513..57229 (-) | 717 | WP_005648032.1 | type II secretion system protein J | Machinery gene |
| CH556_RS00285 (CH556_00285) | comN | 57229..57741 (-) | 513 | WP_005648034.1 | type II secretion system protein | Machinery gene |
| CH556_RS00290 (CH556_00290) | suhB | 57941..58744 (+) | 804 | WP_032824502.1 | inositol-1-monophosphatase | - |
| CH556_RS00295 (CH556_00295) | nrfE | 58853..60760 (+) | 1908 | WP_116945029.1 | heme lyase NrfEFG subunit NrfE | - |
| CH556_RS00300 (CH556_00300) | - | 60760..61290 (+) | 531 | WP_116945028.1 | DsbE family thiol:disulfide interchange protein | - |
| CH556_RS00305 (CH556_00305) | nrfF | 61287..62441 (+) | 1155 | WP_116945027.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19850.04 Da Isoelectric Point: 8.4863
>NTDB_id=310254 CH556_RS00285 WP_005648034.1 57229..57741(-) (comN) [Haemophilus influenzae strain P595-8370]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPEEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPEEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=310254 CH556_RS00285 WP_005648034.1 57229..57741(-) (comN) [Haemophilus influenzae strain P595-8370]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGGAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGGAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
98.824 |
100 |
0.988 |