Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   CH611_RS01855 Genome accession   NZ_CP031685
Coordinates   370559..370855 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain P650-8603     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 365559..375855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CH611_RS01845 (CH611_01845) - 366992..369937 (+) 2946 WP_116953892.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  CH611_RS01850 (CH611_01850) - 370207..370566 (+) 360 WP_116945636.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CH611_RS01855 (CH611_01855) HI0659 370559..370855 (+) 297 WP_005650837.1 helix-turn-helix transcriptional regulator Machinery gene
  CH611_RS01860 (CH611_01860) - 371039..372955 (+) 1917 WP_116945637.1 ABC transporter ATP-binding protein -
  CH611_RS01865 (CH611_01865) - 372965..373501 (+) 537 WP_116945638.1 type I DNA topoisomerase -
  CH611_RS01870 (CH611_01870) - 373517..374068 (+) 552 WP_116945639.1 Sua5/YciO/YrdC/YwlC family protein -
  CH611_RS01875 (CH611_01875) aroE 374072..374890 (+) 819 WP_116945640.1 shikimate dehydrogenase -
  CH611_RS01880 (CH611_01880) - 374887..375444 (+) 558 WP_116945641.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=310012 CH611_RS01855 WP_005650837.1 370559..370855(+) (HI0659) [Haemophilus influenzae strain P650-8603]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=310012 CH611_RS01855 WP_005650837.1 370559..370855(+) (HI0659) [Haemophilus influenzae strain P650-8603]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGTTATTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTATCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment