Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   EYQ98_RS17095 Genome accession   NZ_CP038186
Coordinates   3295440..3295913 (-) Length   157 a.a.
NCBI ID   WP_134778791.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MCC 2514     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3290440..3300913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYQ98_RS17055 (EYQ98_17055) - 3290953..3291741 (+) 789 WP_003184598.1 ABC transporter ATP-binding protein -
  EYQ98_RS17060 (EYQ98_17060) - 3291704..3292528 (+) 825 WP_009329424.1 ABC transporter permease -
  EYQ98_RS17065 (EYQ98_17065) ytkD 3292559..3293035 (-) 477 WP_003184602.1 RNA deprotection pyrophosphohydrolase -
  EYQ98_RS17070 (EYQ98_17070) - 3293230..3293553 (-) 324 WP_003184604.1 hypothetical protein -
  EYQ98_RS17075 (EYQ98_17075) - 3293601..3294005 (-) 405 WP_003184607.1 phage holin family protein -
  EYQ98_RS17080 (EYQ98_17080) - 3294157..3294594 (-) 438 WP_003184609.1 Dps family protein -
  EYQ98_RS17085 (EYQ98_17085) ytzI 3294728..3294871 (+) 144 WP_011201722.1 YtzI protein -
  EYQ98_RS17090 (EYQ98_17090) - 3294865..3295308 (-) 444 WP_009329425.1 FixH family protein -
  EYQ98_RS17095 (EYQ98_17095) luxS 3295440..3295913 (-) 474 WP_134778791.1 S-ribosylhomocysteine lyase Regulator
  EYQ98_RS17100 (EYQ98_17100) yidD 3296051..3296278 (+) 228 WP_003184617.1 membrane protein insertion efficiency factor YidD -
  EYQ98_RS17105 (EYQ98_17105) - 3296275..3296844 (-) 570 WP_003184618.1 carbonic anhydrase -
  EYQ98_RS17110 (EYQ98_17110) - 3296971..3298152 (+) 1182 WP_009329426.1 GTP-binding protein -
  EYQ98_RS17115 (EYQ98_17115) - 3298251..3299282 (+) 1032 WP_009329427.1 zinc ABC transporter substrate-binding protein -
  EYQ98_RS17120 (EYQ98_17120) - 3299368..3299613 (-) 246 WP_003184624.1 type B 50S ribosomal protein L31 -

Sequence

Protein


Download         Length: 157 a.a.        Molecular weight: 17871.44 Da        Isoelectric Point: 5.5491

>NTDB_id=309948 EYQ98_RS17095 WP_134778791.1 3295440..3295913(-) (luxS) [Bacillus licheniformis strain MCC 2514]
MPSVESFELDHNAVKAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRTYAEKYDHFDIIDIS
PMGCQTGYYLVVSGEPKVEEIVDLLDDTFKEAVEVTEIPAANEKQCGQAKLHDLEGAKRMMRFWLSQNKEDLLKVFG

Nucleotide


Download         Length: 474 bp        

>NTDB_id=309948 EYQ98_RS17095 WP_134778791.1 3295440..3295913(-) (luxS) [Bacillus licheniformis strain MCC 2514]
ATGCCTTCAGTTGAAAGTTTTGAGCTTGACCATAATGCGGTAAAAGCGCCTTATGTCAGACACTGCGGCGTCCACAAAGT
GGGAACGGACGGCGTCGTCAACAAGTTTGACATCCGTTTTTGCCAGCCGAATAAACAGGCAATGAAACCTGATACGATTC
ATACTTTGGAGCACCTTCTTGCATTTACAATCCGCACATATGCGGAAAAATATGACCACTTTGATATTATCGACATTTCG
CCGATGGGCTGCCAAACGGGCTATTACCTGGTGGTAAGCGGTGAGCCGAAAGTGGAAGAAATCGTTGATTTGCTTGACGA
TACGTTCAAAGAAGCCGTTGAAGTGACTGAAATTCCGGCGGCTAACGAAAAACAGTGCGGCCAGGCAAAGCTTCACGATC
TTGAAGGCGCAAAGCGCATGATGCGTTTTTGGCTTTCGCAAAATAAAGAAGACCTGCTCAAGGTGTTTGGGTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-150)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

35.802

100

0.369

Multiple sequence alignment