Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EYQ98_RS11640 Genome accession   NZ_CP038186
Coordinates   2281446..2283173 (+) Length   575 a.a.
NCBI ID   WP_009328117.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MCC 2514     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2276446..2288173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYQ98_RS11620 (EYQ98_11620) - 2276935..2277147 (+) 213 WP_016885413.1 hypothetical protein -
  EYQ98_RS11625 (EYQ98_11625) - 2277203..2279131 (-) 1929 WP_061576758.1 di-heme oxidoredictase family protein -
  EYQ98_RS11630 (EYQ98_11630) - 2279262..2280836 (+) 1575 WP_009328119.1 alkaline phosphatase family protein -
  EYQ98_RS11635 (EYQ98_11635) - 2280976..2281449 (+) 474 WP_009328118.1 MarR family transcriptional regulator -
  EYQ98_RS11640 (EYQ98_11640) rcrP 2281446..2283173 (+) 1728 WP_009328117.1 ABC transporter ATP-binding protein Regulator
  EYQ98_RS11645 (EYQ98_11645) rcrQ 2283170..2284993 (+) 1824 WP_009328116.1 ABC transporter ATP-binding protein Regulator
  EYQ98_RS11650 (EYQ98_11650) - 2285228..2286442 (+) 1215 WP_003182494.1 cytochrome P450 -
  EYQ98_RS11655 (EYQ98_11655) - 2286491..2287207 (-) 717 WP_003182496.1 3-ketoacyl-ACP reductase -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 63434.46 Da        Isoelectric Point: 9.6402

>NTDB_id=309914 EYQ98_RS11640 WP_009328117.1 2281446..2283173(+) (rcrP) [Bacillus licheniformis strain MCC 2514]
MISLLKYLKPYKLQVILVAVFTLLSSVLELYLPTLMADVVDVGIVNSDMPFILKTGGWMIACSLLAIMMTVGKAFFASKT
ALGFGRDIRRKLFVKVEHHSMDEFGKISSASLITRTTNDVKQVQDVLNMMLSLMTRAPLMLVGGIVLAVSRDAKLSIIFL
AALPILAGLIFLITRKAVPLFGVLQKKTDRLNLVLREGLTGVRVIRAFNRVDQEKVRFQKANEEFRDTGIAVNRIMAFLF
PVMMIMMNFTNIAIIWFGGIRIDQGSMQVGNLMAFLQYASMILIALIMLAMTFVMIPRAQASAGRINEVLLTEPSITDPK
ERQKDSGLRGYVEFQNVTFRYAGAEKPVLEDISFKAKPGETTAIIGSTGAGKTTILQLIPRFFDIEKGTVLVNGTDVRKM
AQKELRAKIGYVPQKASIFSGTIKDNIRFGKEDATDEEILEALETAQAAEFVEGKENGIESEIEQAGANLSGGQKQRLSI
ARALVRKPEIYLFDDSFSALDYKTDQKLRKALKKTTADAAVIIVAQRVSTITDADQIIVLNEGKIAGIGTHQQLLAENGI
YQEIVASQQAEEESA

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=309914 EYQ98_RS11640 WP_009328117.1 2281446..2283173(+) (rcrP) [Bacillus licheniformis strain MCC 2514]
ATGATCTCACTCTTAAAATATTTAAAGCCCTATAAGCTGCAAGTGATTCTCGTCGCTGTTTTTACTTTGCTGAGCAGTGT
GCTTGAGCTTTATTTGCCGACGTTGATGGCTGATGTCGTTGATGTCGGAATCGTAAACAGTGATATGCCATTTATTTTGA
AAACCGGCGGCTGGATGATCGCCTGCTCCCTTCTGGCCATCATGATGACTGTCGGAAAAGCGTTTTTCGCTTCGAAAACA
GCCCTCGGCTTTGGAAGAGATATCAGGCGCAAACTGTTTGTCAAAGTTGAACACCATTCAATGGATGAATTCGGAAAAAT
CAGTTCTGCTTCTCTCATTACCCGTACCACCAATGATGTCAAGCAGGTCCAAGATGTGCTCAACATGATGCTTTCATTGA
TGACGAGAGCGCCGTTAATGCTGGTCGGCGGTATTGTGCTTGCGGTTTCCAGAGATGCCAAGCTGTCGATTATATTTCTG
GCCGCTCTCCCGATACTTGCAGGGCTGATTTTTCTCATTACAAGAAAAGCTGTCCCCTTATTCGGCGTCCTGCAAAAAAA
GACGGATCGTCTCAACCTTGTTCTCAGGGAAGGTTTGACGGGCGTTCGTGTCATTCGCGCGTTTAACCGCGTTGATCAAG
AAAAAGTCCGGTTTCAAAAAGCGAACGAAGAATTTCGCGATACAGGCATCGCCGTCAACAGAATCATGGCTTTTCTATTC
CCTGTCATGATGATTATGATGAATTTCACGAACATCGCGATTATCTGGTTCGGAGGCATCCGCATCGATCAAGGCAGCAT
GCAGGTCGGGAACTTAATGGCTTTCCTTCAATATGCATCGATGATTCTAATTGCGCTGATCATGCTTGCGATGACATTCG
TGATGATCCCAAGGGCTCAGGCATCTGCCGGCCGCATTAATGAAGTGCTGTTAACAGAGCCTTCGATTACCGATCCGAAA
GAGCGACAGAAAGACAGCGGCTTGCGCGGTTATGTTGAGTTTCAGAATGTGACTTTTCGTTATGCCGGGGCCGAAAAGCC
CGTTCTCGAAGATATCTCGTTCAAGGCAAAGCCGGGTGAGACGACTGCGATCATCGGCAGCACAGGAGCGGGAAAAACGA
CGATTCTTCAATTGATCCCGAGATTTTTCGATATTGAAAAAGGAACTGTGCTAGTCAACGGAACAGATGTCAGAAAGATG
GCGCAAAAGGAGCTTCGCGCGAAAATCGGCTATGTCCCGCAAAAAGCTTCAATATTCAGCGGGACGATTAAAGACAATAT
CCGCTTTGGCAAAGAAGATGCAACAGATGAAGAAATTTTGGAAGCACTTGAAACGGCACAGGCTGCCGAGTTTGTAGAAG
GCAAGGAAAACGGAATTGAATCTGAAATCGAGCAGGCCGGAGCCAATCTTTCAGGCGGCCAGAAACAGCGGCTTTCCATC
GCCAGGGCATTAGTCAGAAAACCGGAAATTTATTTATTTGACGACAGCTTTTCGGCGCTTGATTACAAAACGGATCAAAA
GCTGAGAAAAGCGCTGAAGAAAACAACCGCTGATGCCGCCGTCATCATCGTTGCCCAAAGGGTAAGCACGATTACGGATG
CGGATCAAATCATCGTTTTAAATGAAGGAAAAATAGCCGGCATCGGCACTCATCAACAATTGCTTGCTGAAAACGGCATT
TACCAGGAAATCGTCGCATCACAGCAGGCTGAGGAGGAAAGCGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(349-496)

ABC transporter transmembrane region (ABC_membrane)

(15-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

41.056

100

0.419

Multiple sequence alignment