Detailed information NTG0309866

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EYQ98_RS06315
• Genome accession: NZ_CP038186
• Coordinates: 1260226..1261344 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain MCC 2514
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1255226..1266344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYQ98_RS06290 (EYQ98_06290)	-	1255426..1256931 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
EYQ98_RS06295 (EYQ98_06295)	-	1257013..1258224 (-)	1212	WP_003180218.1	cation:proton antiporter	-
EYQ98_RS06300 (EYQ98_06300)	-	1258231..1258728 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
EYQ98_RS06305 (EYQ98_06305)	-	1258793..1259122 (-)	330	WP_016886161.1	hypothetical protein	-
EYQ98_RS06310 (EYQ98_06310)	-	1259323..1260099 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
EYQ98_RS06315 (EYQ98_06315)	rapC	1260226..1261344 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
EYQ98_RS21995	-	1261334..1261471 (+)	138	WP_016886158.1	hypothetical protein	-
EYQ98_RS06320 (EYQ98_06320)	-	1261476..1261754 (+)	279	WP_003180226.1	hypothetical protein	-
EYQ98_RS06325 (EYQ98_06325)	-	1261829..1262014 (-)	186	WP_003180228.1	YhzD family protein	-
EYQ98_RS06330 (EYQ98_06330)	-	1262132..1263028 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
EYQ98_RS06335 (EYQ98_06335)	-	1263021..1264289 (+)	1269	WP_003180232.1	ABC transporter permease	-
EYQ98_RS06340 (EYQ98_06340)	-	1264409..1265635 (+)	1227	WP_009328954.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=309866 EYQ98_RS06315 WP_009328956.1 1260226..1261344(+) (rapC) [Bacillus licheniformis strain MCC 2514]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=309866 EYQ98_RS06315 WP_009328956.1 1260226..1261344(+) (rapC) [Bacillus licheniformis strain MCC 2514]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374