Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CH631_RS03645 | Genome accession | NZ_CP031680 |
| Coordinates | 722458..722910 (+) | Length | 150 a.a. |
| NCBI ID | WP_116939872.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain P672-7661 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 717458..727910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH631_RS03625 (CH631_03625) | rsmE | 717923..718660 (-) | 738 | WP_005656289.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| CH631_RS03630 (CH631_03630) | lnt | 718710..720239 (-) | 1530 | WP_116940283.1 | apolipoprotein N-acyltransferase | - |
| CH631_RS03635 (CH631_03635) | corC | 720262..721161 (-) | 900 | WP_116939870.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| CH631_RS03640 (CH631_03640) | ampD | 721792..722343 (-) | 552 | WP_071162800.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| CH631_RS03645 (CH631_03645) | pilA | 722458..722910 (+) | 453 | WP_116939872.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CH631_RS03650 (CH631_03650) | pilB | 722907..724298 (+) | 1392 | WP_116939874.1 | GspE/PulE family protein | Machinery gene |
| CH631_RS03655 (CH631_03655) | pilC | 724295..725512 (+) | 1218 | WP_112102453.1 | type II secretion system F family protein | Machinery gene |
| CH631_RS03660 (CH631_03660) | pilD | 725509..726201 (+) | 693 | WP_112102454.1 | prepilin peptidase | Machinery gene |
| CH631_RS03665 (CH631_03665) | rho | 726255..727517 (-) | 1263 | WP_112102455.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 150 a.a. Molecular weight: 15626.98 Da Isoelectric Point: 8.4623
>NTDB_id=309853 CH631_RS03645 WP_116939872.1 722458..722910(+) (pilA) [Haemophilus influenzae strain P672-7661]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNETTTNCTGGKNGI
AADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQATGNAAAGVTWTTTCKGTDASLFPANFCGSITQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNETTTNCTGGKNGI
AADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQATGNAAAGVTWTTTCKGTDASLFPANFCGSITQ
Nucleotide
Download Length: 453 bp
>NTDB_id=309853 CH631_RS03645 WP_116939872.1 722458..722910(+) (pilA) [Haemophilus influenzae strain P672-7661]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACTAAAAAAGCAGCGGTATCTGAATTACTGCAAGCGTCAGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGTACAAATGAAACAACAACAAATTGTACGGGTGGAAAAAATGGTATT
GCAGCAGATATAACCACAGCAAAAGGCTATGTAGCCTCAGTAAAAACGCAATCAGGTGGCATTACAGTAAAAGGGAATGG
CACATTAGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAGCAGGTGTAACTTGGACAACAACTTGCAAAG
GAACGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTATCACACAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACTAAAAAAGCAGCGGTATCTGAATTACTGCAAGCGTCAGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGTACAAATGAAACAACAACAAATTGTACGGGTGGAAAAAATGGTATT
GCAGCAGATATAACCACAGCAAAAGGCTATGTAGCCTCAGTAAAAACGCAATCAGGTGGCATTACAGTAAAAGGGAATGG
CACATTAGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAGCAGGTGTAACTTGGACAACAACTTGCAAAG
GAACGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTATCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae Rd KW20 |
94.667 |
100 |
0.947 |
| pilA | Haemophilus influenzae 86-028NP |
94 |
100 |
0.94 |
| pilA | Glaesserella parasuis strain SC1401 |
54.362 |
99.333 |
0.54 |
| pilA | Vibrio campbellii strain DS40M4 |
41.135 |
94 |
0.387 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.189 |
98.667 |
0.387 |
| pilA2 | Legionella pneumophila str. Paris |
39.286 |
93.333 |
0.367 |