Detailed information NTG0309464

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: E3U39_RS12180
• Genome accession: NZ_CP038028
• Coordinates: 2469806..2472679 (+)
• Length: 957 a.a.
• NCBI ID: WP_053574040.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain FS1092
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2464806..2477679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3U39_RS12170 (E3U39_12170)	-	2467401..2467637 (+)	237	WP_003151438.1	CsbA family protein	-
E3U39_RS12175 (E3U39_12175)	uvrB	2467813..2469798 (+)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
E3U39_RS12180 (E3U39_12180)	uvrA	2469806..2472679 (+)	2874	WP_053574040.1	excinuclease ABC subunit UvrA	Machinery gene
E3U39_RS12185 (E3U39_12185)	-	2472705..2472965 (-)	261	WP_012118557.1	hypothetical protein	-
E3U39_RS12190 (E3U39_12190)	-	2473163..2473489 (+)	327	WP_003151444.1	hypothetical protein	-
E3U39_RS12195 (E3U39_12195)	-	2473514..2474611 (+)	1098	WP_007407448.1	DUF4097 domain-containing protein	-
E3U39_RS12200 (E3U39_12200)	-	2474616..2474810 (+)	195	WP_003151448.1	PspC domain-containing protein	-
E3U39_RS12205 (E3U39_12205)	-	2474811..2475170 (+)	360	WP_007407446.1	phage holin family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106173.53 Da
• Isoelectric Point: 6.6183

>NTDB_id=309464 E3U39_RS12180 WP_053574040.1 2469806..2472679(+) (uvrA) [Bacillus amyloliquefaciens strain FS1092]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQTVCRHYGIDMETPVKDLPKHQLDKVLYGSGNERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSKKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGVQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=309464 E3U39_RS12180 WP_053574040.1 2469806..2472679(+) (uvrA) [Bacillus amyloliquefaciens strain FS1092]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCAAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCTCCGGCGATCAGCATTGATCAGAAAACGACGAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTCCGGCTGCTGTACGCGAGAGTCGGGAAGCCTCACTGCCCGGAGCACGGCATTGAAATTACGTCGCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATCATTTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCTGACGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATCGTTGTCAAGGAAG
GCGTTGCCGCCCGGCTTTCCGACTCGCTGGAAACCGCGCTCCGTTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCTTGTCCGCTGTGCGGTTTTTCTATCGGGGAGCTTGAACCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTCGGCTTGAAGCTGGAAGTGGATCCTGAGCTCGTCA
TCCCCAATCCCGAGCTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGACGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGCAGCGGCAATGAACGGATTTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAATCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTTGCCGTTTTGGTCAACGGGCGTCA
TATCGGAACCATTACGGAGCTTTCCGTCGGCGACGCGCTTGAATTTTTCAAAAACCTGACGCTGTCTAAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTGGAGCGGCTCAGCTTCTTAGATAAAGTCGGTCTTGATTATCTGACGCTG
AGCCGGGCGGCGGGCACGCTGTCAGGCGGAGAAGCGCAGCGCATCAGGCTTGCGACGCAGATCGGCTCCCGTTTGTCAGG
CGTCCTGTATATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTTGAGCATGATGAGGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCCGGCATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCTGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGCTATTTGTCAGGGGTTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGGTTCATTGAAA
TCAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAAATCAAAGGCCTCGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTATACGGGCGTGTTTGATGATATCCGCGATGTATTCGCGCAGACAAATGAAGCAAAG
GTGCGCGGCTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCATTTCCTTCCTGACGTGTACGTCCCGTGTGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TTGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTACGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTCAAGCTTGCTTCCGAATTGCATAAGCGTTCCACAGGCCGGACGCTGTATATTT
TGGACGAACCGACGACAGGCCTCCACGTTGATGATATCGCAAGGCTTTTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACACAATCTCGATATCATTAAAACGGCGGACTACATCGTCGATCTGGGACCTGAAGGCGG
AGCGGGCGGCGGCACGATCGTAGCCTCCGGGACGCCTGAAGAAGTTGTGGAAGTGAAAGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCTGAAAAAGAAACGGCAGCCACATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	68.984	97.701	0.674
uvrA	Streptococcus pneumoniae TIGR4	68.984	97.701	0.674
uvrA	Streptococcus pneumoniae D39	68.984	97.701	0.674