Detailed information NTG0309387

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: E3U39_RS01595
• Genome accession: NZ_CP038028
• Coordinates: 413965..414249 (-)
• Length: 94 a.a.
• NCBI ID: WP_003154557.1
• Uniprot ID: A7Z459
• Organism: Bacillus amyloliquefaciens strain FS1092
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 408965..419249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3U39_RS01575 (E3U39_01575)	ade	409071..410804 (-)	1734	WP_053573394.1	adenine deaminase	-
E3U39_RS01580 (E3U39_01580)	ktrC	410953..411618 (-)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
E3U39_RS01585 (E3U39_01585)	-	411659..412486 (-)	828	WP_015417386.1	gamma-glutamylcyclotransferase family protein	-
E3U39_RS01590 (E3U39_01590)	-	412488..413792 (-)	1305	WP_007409646.1	ATP-binding protein	-
E3U39_RS01595 (E3U39_01595)	abrB	413965..414249 (-)	285	WP_003154557.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
E3U39_RS01605 (E3U39_01605)	mreBH	414520..415527 (+)	1008	WP_003154558.1	cell shape-determining protein MreBH	-
E3U39_RS01610 (E3U39_01610)	-	415599..415733 (+)	135	WP_003154559.1	protein YkpC	-
E3U39_RS01615 (E3U39_01615)	-	415834..417066 (+)	1233	WP_007409644.1	aminopeptidase	-
E3U39_RS01620 (E3U39_01620)	-	417098..418006 (-)	909	WP_015417384.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10584.45 Da
• Isoelectric Point: 5.2271

>NTDB_id=309387 E3U39_RS01595 WP_003154557.1 413965..414249(-) (abrB) [Bacillus amyloliquefaciens strain FS1092]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITPENQEYGNGKIILSPEGAK
MLLEEIEEALKDRS

Nucleotide

• Length: 285 bp

>NTDB_id=309387 E3U39_RS01595 WP_003154557.1 413965..414249(-) (abrB) [Bacillus amyloliquefaciens strain FS1092]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTGAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACTCCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGATAGATCATAA

Domains

Predicted by InterProScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A7Z459

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543