Detailed information NTG0309310

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: DY470_RS26150
• Genome accession: NZ_CP031642
• Coordinates: 4911092..4912441 (-)
• Length: 449 a.a.
• NCBI ID: WP_071736555.1
• Uniprot ID: -
• Organism: Bacillus anthracis strain MCCC 1A02161
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4906092..4917441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DY470_RS26130 (DY470_26130)	secA	4906414..4908921 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
DY470_RS26135 (DY470_26135)	raiA	4909198..4909740 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
DY470_RS26140 (DY470_26140)	cspC	4910064..4910261 (-)	198	WP_001990088.1	cold shock protein CspC	-
DY470_RS26145 (DY470_26145)	comFC	4910388..4911092 (-)	705	WP_002157779.1	comF operon protein ComFC	-
DY470_RS26150 (DY470_26150)	comFA	4911092..4912441 (-)	1350	WP_071736555.1	ATP-dependent helicase ComFA	Machinery gene
DY470_RS26155 (DY470_26155)	-	4912569..4913997 (-)	1429	Protein_5038	NlpC/P60 family protein	-
DY470_RS26160 (DY470_26160)	-	4914145..4914459 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
DY470_RS26165 (DY470_26165)	-	4914633..4915475 (-)	843	WP_000844766.1	DegV family protein	-
DY470_RS26170 (DY470_26170)	-	4915715..4916350 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51219.86 Da
• Isoelectric Point: 9.5047

>NTDB_id=309310 DY470_RS26150 WP_071736555.1 4911092..4912441(-) (comFA) [Bacillus anthracis strain MCCC 1A02161]
MLAGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEIGLLLKGVDHRIDGVHAEDPMRKEKVEAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=309310 DY470_RS26150 WP_071736555.1 4911092..4912441(-) (comFA) [Bacillus anthracis strain MCCC 1A02161]
ATGCTCGCTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGCGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAAAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTCGCAACGACGCATCAATTGTTACGTTATTATAGAGCGTTTC
ATGTAATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGCTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAGGCCTGTTATTGAAAGGGGTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGAAGCGTTTCGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.153	93.096	0.486
comFA	Latilactobacillus sakei subsp. sakei 23K	40.75	89.087	0.363