Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   E3C75_RS09180 Genome accession   NZ_CP038020
Coordinates   1741989..1742669 (-) Length   226 a.a.
NCBI ID   WP_111679645.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1736989..1747669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS09150 - 1737197..1737646 (-) 450 WP_111679642.1 cytidine deaminase -
  E3C75_RS09155 - 1737657..1737836 (-) 180 Protein_1761 ABC transporter permease -
  E3C75_RS09160 - 1737838..1738035 (-) 198 Protein_1762 YkgJ family cysteine cluster protein -
  E3C75_RS09165 - 1738120..1740120 (-) 2001 WP_111679643.1 ABC transporter permease -
  E3C75_RS09170 - 1740122..1740880 (-) 759 WP_111679644.1 ABC transporter ATP-binding protein -
  E3C75_RS09175 - 1741025..1741996 (-) 972 WP_041827155.1 sensor histidine kinase -
  E3C75_RS09180 braR 1741989..1742669 (-) 681 WP_111679645.1 response regulator transcription factor Regulator
  E3C75_RS09185 - 1743113..1743693 (+) 581 Protein_1767 xanthine phosphoribosyltransferase -
  E3C75_RS09190 - 1743693..1744969 (+) 1277 Protein_1768 nucleobase:cation symporter-2 family protein -
  E3C75_RS09195 - 1745097..1746446 (+) 1350 WP_162173404.1 MATE family efflux transporter -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26059.40 Da        Isoelectric Point: 5.0048

>NTDB_id=309260 E3C75_RS09180 WP_111679645.1 1741989..1742669(-) (braR) [Streptococcus thermophilus strain ATCC 19258]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QALFEHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=309260 E3C75_RS09180 WP_111679645.1 1741989..1742669(-) (braR) [Streptococcus thermophilus strain ATCC 19258]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAATGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGACATTG
GTTTACCTCTATTTAATGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGTGGGGACGACTTTGTGACTAAACCCTTTGACCAAAATGT
TCTCTTGGCAAAAATTCAAGGGCTTTTGCGCCGATCTTATGAGTTTGGAAAGGATCAGAGTCTTTTGGAATATATGGGTG
TGATTTTGAACCTTAAGGCCATGGATCTGGTTTATCAGGGAGAAGTCGTTTCTTTGACCAAGAACGAGTTTCAGATTTTA
CAAGCTCTCTTCGAACATGCTGGTAATATCGTTAGTCGGGAAGACCTCATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGATAATACCCTGTCTGTCAATGTGGCACGTTTACGTAAGAAGTTAGAGGCAGTTGGTTTGAAGGACTTTATTGAAA
CCAAGAAAGGTGTCGGTTACGGGTTGCGTCATGATGGATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363

Multiple sequence alignment